Gene annotation
Transcriptome id Sobic.001G106700.1
Synonym Sb01g009530
Functional annotation expressed protein
UniProt C5WM23
Pfam -
Panther DB PTHR33700 PTHR33700:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37820 : -
RAP-DB (Rice) LOC_Os03g51640.1 : expressed protein
MaizeGDB (Corn) Zm00025a007968 , Zm00025a016894
Brachypodium KQK13435 , KQK13436 , KQK13437 , PNT74209
Barley HORVU4Hr1G009570.1 , HORVU4Hr1G009570.3 , HORVU4Hr1G009570.2 , HORVU4Hr1G009570.5 , HORVU4Hr1G009570.4 , HORVU4Hr1G009570.7 , HORVU4Hr1G009570.6
Wheat -
Populus -


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cDNA sequences
Sobic.001G106700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370900 expressed protein -
2 Sobic.003G117900 protein kinase, putative, expressed -
3 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.001G473300 stage II sporulation protein E, putative, expressed -
5 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
6 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
7 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
8 Sobic.007G216100 expressed protein -
9 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
10 Sobic.004G183501 - -
11 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.001G013500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
13 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
14 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
15 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
16 Sobic.003G246700 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed -
17 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
18 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
19 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
20 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3


Gene co-expression network
sample Sobic001G106700 Sobic001G106700 Sobic003G370900 Sobic003G370900 Sobic001G106700--Sobic003G370900 Sobic003G117900 Sobic003G117900 Sobic001G106700--Sobic003G117900 Sobic001G007200 Sobic001G007200 Sobic001G106700--Sobic001G007200 Sobic001G473300 Sobic001G473300 Sobic001G106700--Sobic001G473300 Sobic001G460600 Sobic001G460600 Sobic001G106700--Sobic001G460600 Sobic001G415500 Sobic001G415500 Sobic001G106700--Sobic001G415500 Sobic002G134001 Sobic002G134001 Sobic001G106700--Sobic002G134001 Sobic007G216100 Sobic007G216100 Sobic001G106700--Sobic007G216100 Sobic009G185800 Sobic009G185800 Sobic001G106700--Sobic009G185800 Sobic003G370900--Sobic001G106700 Sobic003G370900--Sobic001G473300 Sobic003G370900--Sobic003G117900 Sobic001G181700 Sobic001G181700 Sobic003G370900--Sobic001G181700 Sobic003G370900--Sobic001G460600 Sobic007G058700 Sobic007G058700 Sobic003G370900--Sobic007G058700 Sobic004G235000 Sobic004G235000 Sobic003G370900--Sobic004G235000 Sobic003G370900--Sobic001G007200 Sobic009G165800 Sobic009G165800 Sobic003G370900--Sobic009G165800 Sobic010G042100 Sobic010G042100 Sobic003G117900--Sobic010G042100 Sobic003G117900--Sobic003G370900 Sobic003G117900--Sobic001G106700 Sobic001G329100 Sobic001G329100 Sobic003G117900--Sobic001G329100 Sobic003G117900--Sobic001G007200 Sobic004G167400 Sobic004G167400 Sobic003G117900--Sobic004G167400 Sobic004G067100 Sobic004G067100 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800 Sobic010G083700 Sobic010G083700 Sobic001G007200--Sobic010G083700 Sobic001G007200--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G007200--Sobic007G186300 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic009G246950 Sobic009G246950 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic001G473300--Sobic003G370900 Sobic001G473300--Sobic001G106700 Sobic006G254100 Sobic006G254100 Sobic001G473300--Sobic006G254100 Sobic004G118200 Sobic004G118200 Sobic001G473300--Sobic004G118200 Sobic001G473300--Sobic001G181700 Sobic010G074300 Sobic010G074300 Sobic001G473300--Sobic010G074300 Sobic006G092400 Sobic006G092400 Sobic001G473300--Sobic006G092400 Sobic001G473300--Sobic003G117900 Sobic001G473300--Sobic004G235000 Sobic009G225000 Sobic009G225000 Sobic001G460600--Sobic009G225000 Sobic001G460600--Sobic001G106700 Sobic009G135600 Sobic009G135600 Sobic001G460600--Sobic009G135600 Sobic001G460600--Sobic003G370900 Sobic010G000900 Sobic010G000900 Sobic001G460600--Sobic010G000900 Sobic001G460600--Sobic003G117900 Sobic001G461900 Sobic001G461900 Sobic001G460600--Sobic001G461900 Sobic004G289800 Sobic004G289800 Sobic001G460600--Sobic004G289800 Sobic003G323600 Sobic003G323600 Sobic001G460600--Sobic003G323600 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic003G253000 Sobic003G253000 Sobic001G415500--Sobic003G253000 Sobic001G415500--Sobic009G146100 Sobic006G108400 Sobic006G108400 Sobic001G415500--Sobic006G108400 Sobic006G141500 Sobic006G141500 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic009G229200 Sobic009G229200 Sobic002G134001--Sobic009G229200 Sobic009G174900 Sobic009G174900 Sobic002G134001--Sobic009G174900 Sobic003G337000 Sobic003G337000 Sobic002G134001--Sobic003G337000 Sobic006G212100 Sobic006G212100 Sobic002G134001--Sobic006G212100 Sobic004G079100 Sobic004G079100 Sobic002G134001--Sobic004G079100 Sobic009G005900 Sobic009G005900 Sobic002G134001--Sobic009G005900 Sobic001G433400 Sobic001G433400 Sobic002G134001--Sobic001G433400 Sobic002G134001--Sobic001G007200 Sobic002G400000 Sobic002G400000 Sobic002G134001--Sobic002G400000 Sobic007G216100--Sobic010G000900 Sobic002G247500 Sobic002G247500 Sobic007G216100--Sobic002G247500 Sobic007G216100--Sobic003G117900 Sobic003G295900 Sobic003G295900 Sobic007G216100--Sobic003G295900 Sobic007G216100--Sobic001G106700 Sobic007G216100--Sobic004G167400 Sobic001G388200 Sobic001G388200 Sobic007G216100--Sobic001G388200 Sobic002G375300 Sobic002G375300 Sobic007G216100--Sobic002G375300 Sobic007G216100--Sobic003G370900 Sobic001G459200 Sobic001G459200 Sobic009G185800--Sobic001G459200 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic003G130800 Sobic003G130800 Sobic009G185800--Sobic003G130800 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic009G185800--Sobic004G330700 Sobic004G272800 Sobic004G272800 Sobic009G185800--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic009G185800--Sobic003G181500
Octagon: transcription factors


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