Gene annotation
Transcriptome id Sobic.001G473300.1,Sobic.001G473300.2
Synonym
Functional annotation stage II sporulation protein E, putative, expressed
UniProt B4X9B1 , A0A1B6QPY7 , B8QQD4 , A0A1B6QPY4
Pfam PF07228
Panther DB PTHR12320 PTHR12320:SF19
NCBI CDD KOG1379; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT4G33500 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os03g09220.1,LOC_Os03g09220.2 : stage II sporulation protein E, putative, expressed
MaizeGDB (Corn) Zm00025a017922 , Zm00025a053195
Brachypodium KQK23174 , KQJ96601
Barley HORVU1Hr1G082540.1 , HORVU1Hr1G082540.2 , HORVU5Hr1G117220.1 , HORVU5Hr1G117220.2 , HORVU2Hr1G018620.1 , HORVU1Hr1G064790.1 , HORVU1Hr1G082540.8 , HORVU1Hr1G082540.3 , HORVU1Hr1G082540.4 , HORVU1Hr1G082540.6 , HORVU1Hr1G082540.7
Wheat TraesCS1A02G371600 , TraesCS1B02G391400 , TraesCS4B02G267400 , TraesCS1D02G378200 , TraesCS4A02G038300 , TraesCS4D02G267000
Populus -


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cDNA sequences
Sobic.001G473300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370900 expressed protein -
2 Sobic.001G106700 expressed protein -
3 Sobic.006G254100 GTP cyclohydrolase I 1, putative, expressed K01495: GCH1, GTP cyclohydrolase IA
4 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
5 Sobic.001G181700 expressed protein -
6 Sobic.010G074300 smr domain containing protein, expressed -
7 Sobic.006G092400 calmodulin binding protein, putative, expressed -
8 Sobic.003G117900 protein kinase, putative, expressed -
9 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
10 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
11 Sobic.001G508100 expressed protein -
12 Sobic.007G216100 expressed protein -
13 Sobic.010G116400 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
14 Sobic.008G094400 Nodulin MtN3 family protein(PubMedID : 26465154)@Nodulin MtN3 family protein(PubMedID : 26465154)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
16 Sobic.001G251800 OsFBK23 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.002G375300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
18 Sobic.010G230500 expressed protein -
19 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
20 Sobic.007G058700 chaperonin, putative, expressed -


Gene co-expression network
sample Sobic001G473300 Sobic001G473300 Sobic003G370900 Sobic003G370900 Sobic001G473300--Sobic003G370900 Sobic001G106700 Sobic001G106700 Sobic001G473300--Sobic001G106700 Sobic006G254100 Sobic006G254100 Sobic001G473300--Sobic006G254100 Sobic004G118200 Sobic004G118200 Sobic001G473300--Sobic004G118200 Sobic001G181700 Sobic001G181700 Sobic001G473300--Sobic001G181700 Sobic010G074300 Sobic010G074300 Sobic001G473300--Sobic010G074300 Sobic006G092400 Sobic006G092400 Sobic001G473300--Sobic006G092400 Sobic003G117900 Sobic003G117900 Sobic001G473300--Sobic003G117900 Sobic004G235000 Sobic004G235000 Sobic001G473300--Sobic004G235000 Sobic003G370900--Sobic001G106700 Sobic003G370900--Sobic001G473300 Sobic003G370900--Sobic003G117900 Sobic003G370900--Sobic001G181700 Sobic001G460600 Sobic001G460600 Sobic003G370900--Sobic001G460600 Sobic007G058700 Sobic007G058700 Sobic003G370900--Sobic007G058700 Sobic003G370900--Sobic004G235000 Sobic001G007200 Sobic001G007200 Sobic003G370900--Sobic001G007200 Sobic009G165800 Sobic009G165800 Sobic003G370900--Sobic009G165800 Sobic001G106700--Sobic003G370900 Sobic001G106700--Sobic003G117900 Sobic001G106700--Sobic001G007200 Sobic001G106700--Sobic001G473300 Sobic001G106700--Sobic001G460600 Sobic001G415500 Sobic001G415500 Sobic001G106700--Sobic001G415500 Sobic002G134001 Sobic002G134001 Sobic001G106700--Sobic002G134001 Sobic007G216100 Sobic007G216100 Sobic001G106700--Sobic007G216100 Sobic009G185800 Sobic009G185800 Sobic001G106700--Sobic009G185800 Sobic003G214500 Sobic003G214500 Sobic006G254100--Sobic003G214500 Sobic006G254100--Sobic001G473300 Sobic006G254100--Sobic004G235000 Sobic003G355200 Sobic003G355200 Sobic006G254100--Sobic003G355200 Sobic006G254100--Sobic003G370900 Sobic009G229200 Sobic009G229200 Sobic006G254100--Sobic009G229200 Sobic003G243600 Sobic003G243600 Sobic006G254100--Sobic003G243600 Sobic009G084000 Sobic009G084000 Sobic006G254100--Sobic009G084000 Sobic003G264200 Sobic003G264200 Sobic006G254100--Sobic003G264200 Sobic004G118200--Sobic010G074300 Sobic003G229300 Sobic003G229300 Sobic004G118200--Sobic003G229300 Sobic002G386100 Sobic002G386100 Sobic004G118200--Sobic002G386100 Sobic001G268200 Sobic001G268200 Sobic004G118200--Sobic001G268200 Sobic002G130800 Sobic002G130800 Sobic004G118200--Sobic002G130800 Sobic001G476700 Sobic001G476700 Sobic004G118200--Sobic001G476700 Sobic010G147100 Sobic010G147100 Sobic004G118200--Sobic010G147100 Sobic010G013800 Sobic010G013800 Sobic004G118200--Sobic010G013800 Sobic006G133900 Sobic006G133900 Sobic004G118200--Sobic006G133900 Sobic009G222500 Sobic009G222500 Sobic001G181700--Sobic009G222500 Sobic001G181700--Sobic003G370900 Sobic001G080700 Sobic001G080700 Sobic001G181700--Sobic001G080700 Sobic001G181700--Sobic009G165800 Sobic003G012200 Sobic003G012200 Sobic001G181700--Sobic003G012200 Sobic003G344900 Sobic003G344900 Sobic001G181700--Sobic003G344900 Sobic002G110700 Sobic002G110700 Sobic001G181700--Sobic002G110700 Sobic004G348300 Sobic004G348300 Sobic001G181700--Sobic004G348300 Sobic002G352600 Sobic002G352600 Sobic001G181700--Sobic002G352600 Sobic010G074300--Sobic010G147100 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic010G074300--Sobic001G268200 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic006G092400--Sobic002G130800 Sobic006G209400 Sobic006G209400 Sobic006G092400--Sobic006G209400 Sobic006G092400--Sobic010G074300 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic003G220800 Sobic003G220800 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic006G092400--Sobic010G147100 Sobic010G042100 Sobic010G042100 Sobic003G117900--Sobic010G042100 Sobic003G117900--Sobic003G370900 Sobic003G117900--Sobic001G106700 Sobic001G329100 Sobic001G329100 Sobic003G117900--Sobic001G329100 Sobic003G117900--Sobic001G007200 Sobic004G167400 Sobic004G167400 Sobic003G117900--Sobic004G167400 Sobic004G067100 Sobic004G067100 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800 Sobic004G235000--Sobic009G222500 Sobic004G235000--Sobic006G092400 Sobic004G235000--Sobic003G214500 Sobic004G235000--Sobic003G220800 Sobic010G027600 Sobic010G027600 Sobic004G235000--Sobic010G027600 Sobic004G235000--Sobic001G007200 Sobic004G235000--Sobic003G012200 Sobic004G086600 Sobic004G086600 Sobic004G235000--Sobic004G086600 Sobic004G235000--Sobic009G084000
Octagon: transcription factors


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