Gene annotation
Transcriptome id Sobic.001G508100.2,Sobic.001G508100.1
Synonym Sb01g047420
Functional annotation expressed protein
UniProt C5WYU5
Pfam PF06101
Panther DB PTHR17204 PTHR17204:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43950 : Plant protein of unknown function (DUF946)
RAP-DB (Rice) LOC_Os03g04930.1 : expressed protein
MaizeGDB (Corn) Zm00025a000575
Brachypodium KQK23713
Barley HORVU4Hr1G084280.4 , HORVU4Hr1G084280.1 , HORVU4Hr1G084280.2 , HORVU4Hr1G084280.3
Wheat TraesCS4D02G338900 , TraesCS4B02G343700 , TraesCS5A02G512400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G508100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.006G092400 calmodulin binding protein, putative, expressed -
3 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.004G116000 expressed protein -
5 Sobic.006G160300 DNA binding protein, putative, expressed -
6 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
7 Sobic.001G181700 expressed protein -
8 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
9 Sobic.003G086900 C2 domain containing protein, putative, expressed -
10 Sobic.010G196500 zinc-binding protein, putative, expressed -
11 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
12 Sobic.007G179800 TBC domain containing protein, expressed -
13 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
14 Sobic.002G111000 peptidase, putative, expressed -
15 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
16 Sobic.002G386100 expressed protein -
17 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.006G225900 expressed protein -
19 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
20 Sobic.010G147100 VHS and GAT domain containing protein, expressed -


Gene co-expression network
sample Sobic001G508100 Sobic001G508100 Sobic010G242400 Sobic010G242400 Sobic001G508100--Sobic010G242400 Sobic006G092400 Sobic006G092400 Sobic001G508100--Sobic006G092400 Sobic001G121200 Sobic001G121200 Sobic001G508100--Sobic001G121200 Sobic004G116000 Sobic004G116000 Sobic001G508100--Sobic004G116000 Sobic006G160300 Sobic006G160300 Sobic001G508100--Sobic006G160300 Sobic004G067100 Sobic004G067100 Sobic001G508100--Sobic004G067100 Sobic001G181700 Sobic001G181700 Sobic001G508100--Sobic001G181700 Sobic009G217100 Sobic009G217100 Sobic001G508100--Sobic009G217100 Sobic003G086900 Sobic003G086900 Sobic001G508100--Sobic003G086900 Sobic010G242400--Sobic001G508100 Sobic010G242400--Sobic001G121200 Sobic010G242400--Sobic009G217100 Sobic010G196500 Sobic010G196500 Sobic010G242400--Sobic010G196500 Sobic007G007000 Sobic007G007000 Sobic010G242400--Sobic007G007000 Sobic001G137100 Sobic001G137100 Sobic010G242400--Sobic001G137100 Sobic002G111000 Sobic002G111000 Sobic010G242400--Sobic002G111000 Sobic001G270400 Sobic001G270400 Sobic010G242400--Sobic001G270400 Sobic010G242400--Sobic003G086900 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G209400 Sobic006G209400 Sobic006G092400--Sobic006G209400 Sobic010G074300 Sobic010G074300 Sobic006G092400--Sobic010G074300 Sobic004G235000 Sobic004G235000 Sobic006G092400--Sobic004G235000 Sobic006G092400--Sobic001G508100 Sobic003G220800 Sobic003G220800 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100 Sobic001G390800 Sobic001G390800 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic001G121200--Sobic002G111000 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic001G241100 Sobic001G241100 Sobic004G116000--Sobic001G241100 Sobic003G370700 Sobic003G370700 Sobic004G116000--Sobic003G370700 Sobic004G116000--Sobic001G508100 Sobic010G082700 Sobic010G082700 Sobic004G116000--Sobic010G082700 Sobic007G166100 Sobic007G166100 Sobic004G116000--Sobic007G166100 Sobic004G116000--Sobic010G147100 Sobic003G343500 Sobic003G343500 Sobic004G116000--Sobic003G343500 Sobic004G116000--Sobic001G121200 Sobic001G080700 Sobic001G080700 Sobic004G116000--Sobic001G080700 Sobic003G195000 Sobic003G195000 Sobic006G160300--Sobic003G195000 Sobic006G199200 Sobic006G199200 Sobic006G160300--Sobic006G199200 Sobic006G160300--Sobic001G121200 Sobic006G160300--Sobic001G268200 Sobic006G160300--Sobic009G056200 Sobic006G160300--Sobic003G086900 Sobic007G193700 Sobic007G193700 Sobic006G160300--Sobic007G193700 Sobic006G160300--Sobic010G147100 Sobic006G160300--Sobic003G220800 Sobic004G080100 Sobic004G080100 Sobic004G067100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic003G117900 Sobic003G117900 Sobic004G067100--Sobic003G117900 Sobic004G067100--Sobic001G508100 Sobic004G167400 Sobic004G167400 Sobic004G067100--Sobic004G167400 Sobic002G226900 Sobic002G226900 Sobic004G067100--Sobic002G226900 Sobic004G067100--Sobic006G090000 Sobic003G077900 Sobic003G077900 Sobic004G067100--Sobic003G077900 Sobic009G222500 Sobic009G222500 Sobic001G181700--Sobic009G222500 Sobic003G370900 Sobic003G370900 Sobic001G181700--Sobic003G370900 Sobic001G181700--Sobic001G080700 Sobic009G165800 Sobic009G165800 Sobic001G181700--Sobic009G165800 Sobic003G012200 Sobic003G012200 Sobic001G181700--Sobic003G012200 Sobic003G344900 Sobic003G344900 Sobic001G181700--Sobic003G344900 Sobic002G110700 Sobic002G110700 Sobic001G181700--Sobic002G110700 Sobic004G348300 Sobic004G348300 Sobic001G181700--Sobic004G348300 Sobic002G352600 Sobic002G352600 Sobic001G181700--Sobic002G352600 Sobic009G259400 Sobic009G259400 Sobic009G217100--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic009G217100--Sobic010G000900 Sobic009G217100--Sobic007G007000 Sobic009G217100--Sobic002G352600 Sobic009G217100--Sobic002G226900 Sobic004G006200 Sobic004G006200 Sobic009G217100--Sobic004G006200 Sobic009G217100--Sobic004G348300 Sobic009G217100--Sobic001G137100 Sobic010G251000 Sobic010G251000 Sobic009G217100--Sobic010G251000 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic003G086900--Sobic001G390800 Sobic003G086900--Sobic001G268200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.