Gene annotation
Transcriptome id Sobic.004G116000.4,Sobic.004G116000.2,Sobic.004G116000.3,Sobic.004G116000.1
Synonym Sb04g009650
Functional annotation expressed protein
UniProt C5XZH6
Pfam -
Panther DB PTHR31827:SF10 PTHR31827 PTHR31827 PTHR31827:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64140 : -
RAP-DB (Rice) LOC_Os02g15885.1,LOC_Os02g15880.1,LOC_Os02g15880.2 : expressed protein,CPuORF16 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a019900 , Zm00025a034408
Brachypodium KQJ94294 , KQJ94292 , KQJ94293 , KQJ94290 , KQJ94291 , KQK17739
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G116000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
2 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
3 Sobic.001G508100 expressed protein -
4 Sobic.010G082700 expressed protein -
5 Sobic.007G166100 no apical meristem protein, putative, expressed -
6 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
7 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
8 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
10 Sobic.001G296900 dual specificity protein phosphatase, putative, expressed -
11 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.010G074300 smr domain containing protein, expressed -
13 Sobic.004G142900 - -
14 Sobic.007G179800 TBC domain containing protein, expressed -
15 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.006G160300 DNA binding protein, putative, expressed -
17 Sobic.006G199200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
18 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G122500 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
20 Sobic.001G332500 WRKY81, expressed -


Gene co-expression network
sample Sobic004G116000 Sobic004G116000 Sobic001G241100 Sobic001G241100 Sobic004G116000--Sobic001G241100 Sobic003G370700 Sobic003G370700 Sobic004G116000--Sobic003G370700 Sobic001G508100 Sobic001G508100 Sobic004G116000--Sobic001G508100 Sobic010G082700 Sobic010G082700 Sobic004G116000--Sobic010G082700 Sobic007G166100 Sobic007G166100 Sobic004G116000--Sobic007G166100 Sobic010G147100 Sobic010G147100 Sobic004G116000--Sobic010G147100 Sobic003G343500 Sobic003G343500 Sobic004G116000--Sobic003G343500 Sobic001G121200 Sobic001G121200 Sobic004G116000--Sobic001G121200 Sobic001G080700 Sobic001G080700 Sobic004G116000--Sobic001G080700 Sobic002G294800 Sobic002G294800 Sobic001G241100--Sobic002G294800 Sobic005G027400 Sobic005G027400 Sobic001G241100--Sobic005G027400 Sobic003G195000 Sobic003G195000 Sobic001G241100--Sobic003G195000 Sobic001G289800 Sobic001G289800 Sobic001G241100--Sobic001G289800 Sobic001G268200 Sobic001G268200 Sobic001G241100--Sobic001G268200 Sobic006G199200 Sobic006G199200 Sobic001G241100--Sobic006G199200 Sobic001G241100--Sobic010G147100 Sobic001G289600 Sobic001G289600 Sobic001G241100--Sobic001G289600 Sobic001G079200 Sobic001G079200 Sobic001G241100--Sobic001G079200 Sobic006G133900 Sobic006G133900 Sobic003G370700--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic003G370700--Sobic001G333800 Sobic002G104100 Sobic002G104100 Sobic003G370700--Sobic002G104100 Sobic004G181600 Sobic004G181600 Sobic003G370700--Sobic004G181600 Sobic003G229300 Sobic003G229300 Sobic003G370700--Sobic003G229300 Sobic003G191700 Sobic003G191700 Sobic003G370700--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic003G370700--Sobic009G038900 Sobic005G106600 Sobic005G106600 Sobic003G370700--Sobic005G106600 Sobic007G198300 Sobic007G198300 Sobic003G370700--Sobic007G198300 Sobic010G242400 Sobic010G242400 Sobic001G508100--Sobic010G242400 Sobic006G092400 Sobic006G092400 Sobic001G508100--Sobic006G092400 Sobic001G508100--Sobic001G121200 Sobic001G508100--Sobic004G116000 Sobic006G160300 Sobic006G160300 Sobic001G508100--Sobic006G160300 Sobic004G067100 Sobic004G067100 Sobic001G508100--Sobic004G067100 Sobic001G181700 Sobic001G181700 Sobic001G508100--Sobic001G181700 Sobic009G217100 Sobic009G217100 Sobic001G508100--Sobic009G217100 Sobic003G086900 Sobic003G086900 Sobic001G508100--Sobic003G086900 Sobic001G473600 Sobic001G473600 Sobic010G082700--Sobic001G473600 Sobic007G078600 Sobic007G078600 Sobic010G082700--Sobic007G078600 Sobic003G071000 Sobic003G071000 Sobic010G082700--Sobic003G071000 Sobic005G160400 Sobic005G160400 Sobic010G082700--Sobic005G160400 Sobic007G078500 Sobic007G078500 Sobic010G082700--Sobic007G078500 Sobic009G179700 Sobic009G179700 Sobic010G082700--Sobic009G179700 Sobic010G021500 Sobic010G021500 Sobic010G082700--Sobic010G021500 Sobic003G298100 Sobic003G298100 Sobic010G082700--Sobic003G298100 Sobic009G049300 Sobic009G049300 Sobic010G082700--Sobic009G049300 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic010G000900 Sobic010G000900 Sobic007G166100--Sobic010G000900 Sobic004G356900 Sobic004G356900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic001G085100 Sobic001G085100 Sobic007G166100--Sobic001G085100 Sobic010G027600 Sobic010G027600 Sobic007G166100--Sobic010G027600 Sobic004G066200 Sobic004G066200 Sobic007G166100--Sobic004G066200 Sobic003G316500 Sobic003G316500 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G074300 Sobic010G074300 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic010G147100--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic001G512500 Sobic001G512500 Sobic003G343500--Sobic001G512500 Sobic003G343500--Sobic006G133900 Sobic001G065600 Sobic001G065600 Sobic003G343500--Sobic001G065600 Sobic006G065600 Sobic006G065600 Sobic003G343500--Sobic006G065600 Sobic007G167100 Sobic007G167100 Sobic003G343500--Sobic007G167100 Sobic003G343500--Sobic003G370700 Sobic002G193100 Sobic002G193100 Sobic003G343500--Sobic002G193100 Sobic010G176200 Sobic010G176200 Sobic003G343500--Sobic010G176200 Sobic010G058200 Sobic010G058200 Sobic003G343500--Sobic010G058200 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic002G111000 Sobic002G111000 Sobic001G121200--Sobic002G111000 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000
Octagon: transcription factors


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