Gene annotation
Transcriptome id Sobic.004G142900.2,Sobic.004G142900.3,Sobic.004G142900.1
Synonym
Functional annotation -
UniProt A0A194YPM5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
2 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
3 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
4 Sobic.001G309400 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
5 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
6 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
7 Sobic.002G310200 expressed protein -
8 Sobic.009G191000 MATH domain containing protein, expressed -
9 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
10 Sobic.003G139900 "Highest expression level in embryo, up-regulation in roots in response to exogenous ABA and PEG"(PubMedID : 27501690)@OsSPL1 - SBP-box gene family member, expressed -
11 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
12 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
13 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
14 Sobic.007G104800 expressed protein -
15 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
16 Sobic.008G103200 OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
17 Sobic.007G115200 hydrolase, NUDIX family, domain containing protein, expressed -
18 Sobic.007G096000 expressed protein -
19 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
20 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6


Gene co-expression network
sample Sobic004G142900 Sobic004G142900 Sobic003G029700 Sobic003G029700 Sobic004G142900--Sobic003G029700 Sobic005G027400 Sobic005G027400 Sobic004G142900--Sobic005G027400 Sobic001G409600 Sobic001G409600 Sobic004G142900--Sobic001G409600 Sobic001G309400 Sobic001G309400 Sobic004G142900--Sobic001G309400 Sobic002G399100 Sobic002G399100 Sobic004G142900--Sobic002G399100 Sobic010G101800 Sobic010G101800 Sobic004G142900--Sobic010G101800 Sobic002G310200 Sobic002G310200 Sobic004G142900--Sobic002G310200 Sobic009G191000 Sobic009G191000 Sobic004G142900--Sobic009G191000 Sobic010G079900 Sobic010G079900 Sobic004G142900--Sobic010G079900 Sobic004G341900 Sobic004G341900 Sobic003G029700--Sobic004G341900 Sobic001G214300 Sobic001G214300 Sobic003G029700--Sobic001G214300 Sobic010G013800 Sobic010G013800 Sobic003G029700--Sobic010G013800 Sobic008G047800 Sobic008G047800 Sobic003G029700--Sobic008G047800 Sobic001G497300 Sobic001G497300 Sobic003G029700--Sobic001G497300 Sobic002G006900 Sobic002G006900 Sobic003G029700--Sobic002G006900 Sobic009G026500 Sobic009G026500 Sobic003G029700--Sobic009G026500 Sobic003G029700--Sobic009G191000 Sobic001G205200 Sobic001G205200 Sobic003G029700--Sobic001G205200 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic003G397800 Sobic003G397800 Sobic001G409600--Sobic003G397800 Sobic001G409600--Sobic010G101800 Sobic002G297200 Sobic002G297200 Sobic001G409600--Sobic002G297200 Sobic001G109800 Sobic001G109800 Sobic001G409600--Sobic001G109800 Sobic001G125200 Sobic001G125200 Sobic001G409600--Sobic001G125200 Sobic007G096000 Sobic007G096000 Sobic001G409600--Sobic007G096000 Sobic009G249200 Sobic009G249200 Sobic001G409600--Sobic009G249200 Sobic003G187400 Sobic003G187400 Sobic001G409600--Sobic003G187400 Sobic001G016000 Sobic001G016000 Sobic001G409600--Sobic001G016000 Sobic007G177000 Sobic007G177000 Sobic001G309400--Sobic007G177000 Sobic001G309400--Sobic010G079900 Sobic007G115200 Sobic007G115200 Sobic001G309400--Sobic007G115200 Sobic002G347000 Sobic002G347000 Sobic001G309400--Sobic002G347000 Sobic008G070500 Sobic008G070500 Sobic001G309400--Sobic008G070500 Sobic001G309400--Sobic004G142900 Sobic010G205800 Sobic010G205800 Sobic001G309400--Sobic010G205800 Sobic001G207000 Sobic001G207000 Sobic001G309400--Sobic001G207000 Sobic006G199200 Sobic006G199200 Sobic001G309400--Sobic006G199200 Sobic001G413500 Sobic001G413500 Sobic002G399100--Sobic001G413500 Sobic002G399100--Sobic001G497300 Sobic001G512700 Sobic001G512700 Sobic002G399100--Sobic001G512700 Sobic007G104800 Sobic007G104800 Sobic002G399100--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic002G399100--Sobic004G205600 Sobic001G107500 Sobic001G107500 Sobic002G399100--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic002G399100--Sobic003G298100 Sobic010G153700 Sobic010G153700 Sobic002G399100--Sobic010G153700 Sobic002G399100--Sobic003G029700 Sobic010G101800--Sobic002G297200 Sobic001G155000 Sobic001G155000 Sobic010G101800--Sobic001G155000 Sobic007G167500 Sobic007G167500 Sobic010G101800--Sobic007G167500 Sobic010G028800 Sobic010G028800 Sobic010G101800--Sobic010G028800 Sobic010G101800--Sobic003G397800 Sobic010G101800--Sobic001G409600 Sobic010G101800--Sobic002G310200 Sobic010G053800 Sobic010G053800 Sobic010G101800--Sobic010G053800 Sobic010G101800--Sobic002G309600 Sobic001G222500 Sobic001G222500 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic007G217000 Sobic007G217000 Sobic002G310200--Sobic007G217000 Sobic004G084300 Sobic004G084300 Sobic002G310200--Sobic004G084300 Sobic002G310200--Sobic007G096000 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic008G067600 Sobic008G067600 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic002G008900 Sobic002G008900 Sobic009G191000--Sobic002G008900 Sobic002G411600 Sobic002G411600 Sobic009G191000--Sobic002G411600 Sobic003G422500 Sobic003G422500 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic001G289600 Sobic001G289600 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic004G034900 Sobic004G034900 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic010G079900--Sobic005G027400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic001G222250 Sobic001G222250 Sobic010G079900--Sobic001G222250
Octagon: transcription factors


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