Gene annotation
Transcriptome id Sobic.008G103200.1,Sobic.008G103200.3,Sobic.008G103200.2
Synonym Sb08g015530
Functional annotation OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A1B6PCS5 , A0A1B6PCU9 , A0A1B6PCY6
Pfam PF02897 PF00326 PF00326 PF02897
Panther DB PTHR11757 PTHR11757:SF8
NCBI CDD -
KEGG Orthology K01322; prolyl oligopeptidase
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis GO:0004252serine-type endopeptidase activity GO:0004252serine-type endopeptidase activity GO:0008236serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G76140 : Prolyl oligopeptidase family protein
RAP-DB (Rice) LOC_Os01g01830.1 : OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a054211
Brachypodium KQJ93210
Barley HORVU6Hr1G018520.6 , HORVU6Hr1G018520.7 , HORVU6Hr1G018520.4 , HORVU6Hr1G018520.5 , HORVU6Hr1G018520.2 , HORVU6Hr1G018520.3 , HORVU6Hr1G018520.1
Wheat TraesCS6D02G091300 , TraesCS6D02G091300 , TraesCS6A02G102700 , TraesCS6A02G102700 , TraesCS6B02G131100
Populus PNT47227


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cDNA sequences
Sobic.008G103200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
2 Sobic.003G266001 - -
3 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
4 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
5 Sobic.010G069100 expressed protein -
6 Sobic.002G310200 expressed protein -
7 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
8 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
9 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
10 Sobic.001G289600 BAH domain containing protein, putative, expressed -
11 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
12 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
13 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
14 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
15 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
16 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
17 Sobic.004G021200 expressed protein -
18 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
19 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
20 Sobic.001G241200 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic008G103200 Sobic008G103200 Sobic008G047800 Sobic008G047800 Sobic008G103200--Sobic008G047800 Sobic003G266001 Sobic003G266001 Sobic008G103200--Sobic003G266001 Sobic004G065100 Sobic004G065100 Sobic008G103200--Sobic004G065100 Sobic001G222500 Sobic001G222500 Sobic008G103200--Sobic001G222500 Sobic010G069100 Sobic010G069100 Sobic008G103200--Sobic010G069100 Sobic002G310200 Sobic002G310200 Sobic008G103200--Sobic002G310200 Sobic004G084300 Sobic004G084300 Sobic008G103200--Sobic004G084300 Sobic001G154900 Sobic001G154900 Sobic008G103200--Sobic001G154900 Sobic004G072100 Sobic004G072100 Sobic008G103200--Sobic004G072100 Sobic002G006900 Sobic002G006900 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic001G493200 Sobic001G493200 Sobic003G266001--Sobic001G493200 Sobic005G128400 Sobic005G128400 Sobic003G266001--Sobic005G128400 Sobic003G266001--Sobic008G103200 Sobic003G266001--Sobic010G069100 Sobic003G408600 Sobic003G408600 Sobic003G266001--Sobic003G408600 Sobic003G266001--Sobic004G072100 Sobic004G021200 Sobic004G021200 Sobic003G266001--Sobic004G021200 Sobic001G311500 Sobic001G311500 Sobic003G266001--Sobic001G311500 Sobic007G159900 Sobic007G159900 Sobic003G266001--Sobic007G159900 Sobic001G241200 Sobic001G241200 Sobic004G065100--Sobic001G241200 Sobic004G065100--Sobic002G309600 Sobic007G117400 Sobic007G117400 Sobic004G065100--Sobic007G117400 Sobic003G119000 Sobic003G119000 Sobic004G065100--Sobic003G119000 Sobic005G027400 Sobic005G027400 Sobic004G065100--Sobic005G027400 Sobic004G065100--Sobic001G154900 Sobic005G008800 Sobic005G008800 Sobic004G065100--Sobic005G008800 Sobic005G104500 Sobic005G104500 Sobic004G065100--Sobic005G104500 Sobic005G112300 Sobic005G112300 Sobic004G065100--Sobic005G112300 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G222500--Sobic001G155000 Sobic001G222500--Sobic002G310200 Sobic009G126400 Sobic009G126400 Sobic001G222500--Sobic009G126400 Sobic001G222500--Sobic009G040600 Sobic001G222500--Sobic002G006900 Sobic003G052200 Sobic003G052200 Sobic001G222500--Sobic003G052200 Sobic007G096000 Sobic007G096000 Sobic001G222500--Sobic007G096000 Sobic002G071500 Sobic002G071500 Sobic010G069100--Sobic002G071500 Sobic002G264200 Sobic002G264200 Sobic010G069100--Sobic002G264200 Sobic010G069100--Sobic005G112300 Sobic010G069100--Sobic008G047800 Sobic008G009700 Sobic008G009700 Sobic010G069100--Sobic008G009700 Sobic010G069100--Sobic001G154900 Sobic004G146500 Sobic004G146500 Sobic010G069100--Sobic004G146500 Sobic007G065400 Sobic007G065400 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic002G310200--Sobic007G217000 Sobic002G310200--Sobic004G084300 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic008G067600 Sobic008G067600 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic004G084300--Sobic008G047800 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic004G084300--Sobic009G040600 Sobic004G084300--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic001G154900--Sobic002G309600 Sobic001G289600 Sobic001G289600 Sobic001G154900--Sobic001G289600 Sobic001G154900--Sobic001G241200 Sobic001G154900--Sobic010G069100 Sobic001G154900--Sobic005G008800 Sobic001G154900--Sobic007G117400 Sobic001G154900--Sobic004G065100 Sobic004G009600 Sobic004G009600 Sobic001G154900--Sobic004G009600 Sobic007G105100 Sobic007G105100 Sobic001G154900--Sobic007G105100 Sobic007G218000 Sobic007G218000 Sobic004G072100--Sobic007G218000 Sobic010G053800 Sobic010G053800 Sobic004G072100--Sobic010G053800 Sobic010G275500 Sobic010G275500 Sobic004G072100--Sobic010G275500 Sobic007G132100 Sobic007G132100 Sobic004G072100--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic004G072100--Sobic006G012500 Sobic004G072100--Sobic010G069100 Sobic010G116600 Sobic010G116600 Sobic004G072100--Sobic010G116600 Sobic004G072100--Sobic008G047800 Sobic004G072100--Sobic001G155000
Octagon: transcription factors


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