Gene annotation
Transcriptome id Sobic.007G115200.2,Sobic.007G115200.3,Sobic.007G115200.1
Synonym NUDX15, Sb07g019110, ATNUDT15, ATNUDX15
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt C5YKI5 , A0A1Z5RAE6 , A0A1Z5RA95
Pfam PF00293
Panther DB PTHR12992 PTHR12992:SF7 PTHR12992 PTHR12992:SF10 PTHR12992 PTHR12992:SF9
NCBI CDD KOG3069; Peroxisomal NUDIX hydrolase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT1G28960 : nudix hydrolase homolog 15
RAP-DB (Rice) LOC_Os08g28860.1 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029876
Brachypodium KQJ98148 , KQJ98146 , KQJ98145
Barley HORVU7Hr1G089840.8 , HORVU7Hr1G089840.9 , HORVU7Hr1G089840.2 , HORVU7Hr1G089840.3 , HORVU7Hr1G089840.1 , HORVU7Hr1G089840.6 , HORVU7Hr1G089840.7 , HORVU7Hr1G089840.4 , HORVU7Hr1G089840.5 , HORVU7Hr1G089840.20 , HORVU7Hr1G053190.1 , HORVU7Hr1G089840.19 , HORVU7Hr1G089840.10 , HORVU7Hr1G089840.11 , HORVU7Hr1G089840.12 , HORVU7Hr1G089840.13 , HORVU7Hr1G089840.14 , HORVU7Hr1G089840.15 , HORVU7Hr1G089840.16 , HORVU7Hr1G089840.17
Wheat TraesCS7D02G257500 , TraesCS7B02G153400 , TraesCS7A02G256900
Populus -


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cDNA sequences
Sobic.007G115200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
2 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase
3 Sobic.001G309400 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
4 Sobic.007G104800 expressed protein -
5 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
6 Sobic.002G363600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@circadian clock coupling factor-related, putative, expressed -
7 Sobic.002G351900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
9 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
11 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
12 Sobic.004G142900 - -
13 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
14 Sobic.004G121100 expressed protein -
15 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
16 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
17 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
18 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
19 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
20 Sobic.003G018900 bromodomain containing protein, expressed K11684: bromodomain-containing factor 1


Gene co-expression network
sample Sobic007G115200 Sobic007G115200 Sobic001G107500 Sobic001G107500 Sobic007G115200--Sobic001G107500 Sobic001G016000 Sobic001G016000 Sobic007G115200--Sobic001G016000 Sobic001G309400 Sobic001G309400 Sobic007G115200--Sobic001G309400 Sobic007G104800 Sobic007G104800 Sobic007G115200--Sobic007G104800 Sobic002G347000 Sobic002G347000 Sobic007G115200--Sobic002G347000 Sobic002G363600 Sobic002G363600 Sobic007G115200--Sobic002G363600 Sobic002G351900 Sobic002G351900 Sobic007G115200--Sobic002G351900 Sobic001G281600 Sobic001G281600 Sobic007G115200--Sobic001G281600 Sobic002G092300 Sobic002G092300 Sobic007G115200--Sobic002G092300 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic009G065100 Sobic009G065100 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic002G034600 Sobic002G034600 Sobic001G016000--Sobic002G034600 Sobic010G236400 Sobic010G236400 Sobic001G016000--Sobic010G236400 Sobic003G397800 Sobic003G397800 Sobic001G016000--Sobic003G397800 Sobic001G409600 Sobic001G409600 Sobic001G016000--Sobic001G409600 Sobic001G016000--Sobic004G205600 Sobic004G274200 Sobic004G274200 Sobic001G016000--Sobic004G274200 Sobic002G283600 Sobic002G283600 Sobic001G016000--Sobic002G283600 Sobic007G119200 Sobic007G119200 Sobic001G016000--Sobic007G119200 Sobic006G173100 Sobic006G173100 Sobic001G016000--Sobic006G173100 Sobic007G177000 Sobic007G177000 Sobic001G309400--Sobic007G177000 Sobic010G079900 Sobic010G079900 Sobic001G309400--Sobic010G079900 Sobic001G309400--Sobic007G115200 Sobic001G309400--Sobic002G347000 Sobic008G070500 Sobic008G070500 Sobic001G309400--Sobic008G070500 Sobic004G142900 Sobic004G142900 Sobic001G309400--Sobic004G142900 Sobic010G205800 Sobic010G205800 Sobic001G309400--Sobic010G205800 Sobic001G207000 Sobic001G207000 Sobic001G309400--Sobic001G207000 Sobic006G199200 Sobic006G199200 Sobic001G309400--Sobic006G199200 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic001G119300 Sobic001G119300 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G200600 Sobic007G200600 Sobic007G104800--Sobic007G200600 Sobic001G512700 Sobic001G512700 Sobic007G104800--Sobic001G512700 Sobic007G104800--Sobic004G205600 Sobic007G026300 Sobic007G026300 Sobic007G104800--Sobic007G026300 Sobic007G104800--Sobic001G107500 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic002G347000--Sobic007G115200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic002G363600--Sobic007G115200 Sobic002G010300 Sobic002G010300 Sobic002G363600--Sobic002G010300 Sobic002G363600--Sobic007G026300 Sobic009G198100 Sobic009G198100 Sobic002G363600--Sobic009G198100 Sobic002G363600--Sobic004G205600 Sobic002G363600--Sobic001G107500 Sobic003G081000 Sobic003G081000 Sobic002G363600--Sobic003G081000 Sobic002G363600--Sobic001G016000 Sobic002G363600--Sobic004G274200 Sobic002G351900--Sobic010G056200 Sobic002G351900--Sobic007G115200 Sobic010G005600 Sobic010G005600 Sobic002G351900--Sobic010G005600 Sobic002G351900--Sobic001G281600 Sobic004G121100 Sobic004G121100 Sobic002G351900--Sobic004G121100 Sobic007G078500 Sobic007G078500 Sobic002G351900--Sobic007G078500 Sobic009G157200 Sobic009G157200 Sobic002G351900--Sobic009G157200 Sobic007G052900 Sobic007G052900 Sobic002G351900--Sobic007G052900 Sobic007G095500 Sobic007G095500 Sobic002G351900--Sobic007G095500 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic002G092300--Sobic001G281600 Sobic001G000200 Sobic001G000200 Sobic002G092300--Sobic001G000200 Sobic003G250500 Sobic003G250500 Sobic002G092300--Sobic003G250500 Sobic002G092300--Sobic001G016000
Octagon: transcription factors


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