Gene annotation
Transcriptome id Sobic.002G386100.2,Sobic.002G386100.1
Synonym Sb02g040230
Functional annotation expressed protein
UniProt A0A1B6QFR5 , C5X374
Pfam -
Panther DB PTHR33474 PTHR33474:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g59970.1 : expressed protein
MaizeGDB (Corn) Zm00025a048859
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
2 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
3 Sobic.010G196500 zinc-binding protein, putative, expressed -
4 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.002G187700 expressed protein -
6 Sobic.007G190000 expressed protein -
7 Sobic.003G372500 DUF803 domain containing, putative, expressed -
8 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
9 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
10 Sobic.001G381200 vacuolar-sorting receptor precursor, putative, expressed -
11 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
15 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G508100 expressed protein -
18 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
19 Sobic.009G003300 expressed protein -
20 Sobic.010G074300 smr domain containing protein, expressed -


Gene co-expression network
sample Sobic002G386100 Sobic002G386100 Sobic004G179300 Sobic004G179300 Sobic002G386100--Sobic004G179300 Sobic004G118200 Sobic004G118200 Sobic002G386100--Sobic004G118200 Sobic010G196500 Sobic010G196500 Sobic002G386100--Sobic010G196500 Sobic001G476700 Sobic001G476700 Sobic002G386100--Sobic001G476700 Sobic002G187700 Sobic002G187700 Sobic002G386100--Sobic002G187700 Sobic007G190000 Sobic007G190000 Sobic002G386100--Sobic007G190000 Sobic003G372500 Sobic003G372500 Sobic002G386100--Sobic003G372500 Sobic002G128200 Sobic002G128200 Sobic002G386100--Sobic002G128200 Sobic001G488700 Sobic001G488700 Sobic002G386100--Sobic001G488700 Sobic004G179300--Sobic002G386100 Sobic004G179300--Sobic007G190000 Sobic004G179300--Sobic002G128200 Sobic004G189200 Sobic004G189200 Sobic004G179300--Sobic004G189200 Sobic006G002300 Sobic006G002300 Sobic004G179300--Sobic006G002300 Sobic004G179300--Sobic002G187700 Sobic004G179300--Sobic001G476700 Sobic003G301900 Sobic003G301900 Sobic004G179300--Sobic003G301900 Sobic010G020800 Sobic010G020800 Sobic004G179300--Sobic010G020800 Sobic010G074300 Sobic010G074300 Sobic004G118200--Sobic010G074300 Sobic003G229300 Sobic003G229300 Sobic004G118200--Sobic003G229300 Sobic004G118200--Sobic002G386100 Sobic001G268200 Sobic001G268200 Sobic004G118200--Sobic001G268200 Sobic002G130800 Sobic002G130800 Sobic004G118200--Sobic002G130800 Sobic004G118200--Sobic001G476700 Sobic010G147100 Sobic010G147100 Sobic004G118200--Sobic010G147100 Sobic010G013800 Sobic010G013800 Sobic004G118200--Sobic010G013800 Sobic006G133900 Sobic006G133900 Sobic004G118200--Sobic006G133900 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic003G086900 Sobic003G086900 Sobic010G196500--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic010G196500--Sobic002G187700 Sobic007G160700 Sobic007G160700 Sobic001G476700--Sobic007G160700 Sobic004G103000 Sobic004G103000 Sobic001G476700--Sobic004G103000 Sobic004G169000 Sobic004G169000 Sobic001G476700--Sobic004G169000 Sobic001G476700--Sobic004G118200 Sobic001G476700--Sobic003G229300 Sobic001G476700--Sobic007G190000 Sobic001G476700--Sobic010G074300 Sobic001G476700--Sobic002G386100 Sobic001G476700--Sobic004G179300 Sobic001G481900 Sobic001G481900 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic008G059100 Sobic008G059100 Sobic002G187700--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic002G187700--Sobic006G002300 Sobic003G190400 Sobic003G190400 Sobic002G187700--Sobic003G190400 Sobic002G187700--Sobic004G169000 Sobic007G190000--Sobic010G074300 Sobic007G190000--Sobic004G179300 Sobic007G190000--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic007G190000--Sobic010G227100 Sobic002G146300 Sobic002G146300 Sobic007G190000--Sobic002G146300 Sobic007G190000--Sobic010G020800 Sobic009G074400 Sobic009G074400 Sobic007G190000--Sobic009G074400 Sobic007G190000--Sobic010G147100 Sobic007G190000--Sobic004G189200 Sobic007G075400 Sobic007G075400 Sobic003G372500--Sobic007G075400 Sobic003G372500--Sobic010G147100 Sobic003G316500 Sobic003G316500 Sobic003G372500--Sobic003G316500 Sobic001G050200 Sobic001G050200 Sobic003G372500--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic003G372500--Sobic009G191000 Sobic003G372500--Sobic010G227100 Sobic001G534700 Sobic001G534700 Sobic003G372500--Sobic001G534700 Sobic003G313500 Sobic003G313500 Sobic003G372500--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic003G372500--Sobic001G390800 Sobic005G149700 Sobic005G149700 Sobic002G128200--Sobic005G149700 Sobic006G104600 Sobic006G104600 Sobic002G128200--Sobic006G104600 Sobic002G128200--Sobic006G002300 Sobic006G087700 Sobic006G087700 Sobic002G128200--Sobic006G087700 Sobic002G128200--Sobic004G179300 Sobic002G128200--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic002G128200--Sobic009G011600 Sobic001G517800 Sobic001G517800 Sobic002G128200--Sobic001G517800 Sobic001G375100 Sobic001G375100 Sobic002G128200--Sobic001G375100 Sobic001G488700--Sobic008G059100 Sobic001G488700--Sobic001G500800 Sobic001G488700--Sobic010G196500 Sobic001G488700--Sobic002G187700 Sobic004G233200 Sobic004G233200 Sobic001G488700--Sobic004G233200 Sobic006G175800 Sobic006G175800 Sobic001G488700--Sobic006G175800 Sobic003G302800 Sobic003G302800 Sobic001G488700--Sobic003G302800 Sobic001G488700--Sobic001G481900 Sobic002G266000 Sobic002G266000 Sobic001G488700--Sobic002G266000
Octagon: transcription factors


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