Gene annotation
Transcriptome id Sobic.001G488700.1
Synonym Sb01g045720, ATSUC3,SbSUT1;SUT1;SbSUT1, SUT2, ATSUT2, SUC3
Functional annotation sucrose transporter 2 (PubMedID : 26465154)
sucrose transporter 2 (PubMedID : 26465154)
sucrose transporters( (PubMedID : 27986867,(PubMedID : 23805151)
Sucrose transporter genes (PubMedID : 24456189)
Sugar transporter (PubMedID : 27330561)
sucrose transporter, putativ, expressed
UniProt D1MAD6 , A0A1P8SGR4 , C5WVY0
Pfam PF13347
Panther DB PTHR19432 PTHR19432:SF36
NCBI CDD KOG0637; Sucrose transporter and related proteins
KEGG Orthology K15378; solute carrier family 45, member 1/2/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02860 : sucrose transporter 2
RAP-DB (Rice) LOC_Os03g07480.2 : sucrose transporter, putativ, expressed
MaizeGDB (Corn) Zm00025a007009 , Zm00025a020799 , Zm00025a031716 , Zm00025a053331 , Zm00025a000862
Brachypodium KQK23402 , KQK23403
Barley HORVU1Hr1G035760.10 , HORVU1Hr1G035760.11 , HORVU1Hr1G035760.12 , HORVU1Hr1G035760.7 , HORVU4Hr1G075200.4 , HORVU4Hr1G075200.5 , HORVU4Hr1G075200.1 , HORVU4Hr1G075200.2 , HORVU4Hr1G075200.3 , HORVU2Hr1G112080.10 , HORVU2Hr1G112080.11 , HORVU1Hr1G035760.2 , HORVU1Hr1G035760.3 , HORVU1Hr1G035760.1 , HORVU1Hr1G035760.6 , HORVU1Hr1G035760.4 , HORVU1Hr1G035760.5 , HORVU1Hr1G035760.8 , HORVU1Hr1G035760.9 , HORVU2Hr1G112080.8 , HORVU2Hr1G112080.9 , HORVU2Hr1G112080.4 , HORVU2Hr1G112080.5 , HORVU2Hr1G112080.6 , HORVU2Hr1G112080.7 , HORVU2Hr1G112080.1 , HORVU2Hr1G112080.2 , HORVU2Hr1G112080.3
Wheat TraesCS2D02G505700 , TraesCS4A02G016400 , TraesCS4D02G286500 , TraesCS4B02G287800 , TraesCS2A02G505000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
2 Sobic.001G500800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
3 Sobic.010G196500 zinc-binding protein, putative, expressed -
4 Sobic.002G187700 expressed protein -
5 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
6 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
7 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
8 Sobic.001G481900 SAC domain containing protein, putative, expressed -
9 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
10 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
12 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
13 Sobic.002G386100 expressed protein -
14 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
15 Sobic.001G298700 - -
16 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
17 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
18 Sobic.003G086900 C2 domain containing protein, putative, expressed -
19 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase


Gene co-expression network
sample Sobic001G488700 Sobic001G488700 Sobic008G059100 Sobic008G059100 Sobic001G488700--Sobic008G059100 Sobic001G500800 Sobic001G500800 Sobic001G488700--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic001G488700--Sobic010G196500 Sobic002G187700 Sobic002G187700 Sobic001G488700--Sobic002G187700 Sobic004G233200 Sobic004G233200 Sobic001G488700--Sobic004G233200 Sobic006G175800 Sobic006G175800 Sobic001G488700--Sobic006G175800 Sobic003G302800 Sobic003G302800 Sobic001G488700--Sobic003G302800 Sobic001G481900 Sobic001G481900 Sobic001G488700--Sobic001G481900 Sobic002G266000 Sobic002G266000 Sobic001G488700--Sobic002G266000 Sobic008G059100--Sobic001G488700 Sobic008G059100--Sobic002G187700 Sobic001G409300 Sobic001G409300 Sobic008G059100--Sobic001G409300 Sobic008G059100--Sobic001G481900 Sobic008G059100--Sobic004G233200 Sobic008G059100--Sobic003G302800 Sobic009G190700 Sobic009G190700 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic001G500800--Sobic001G488700 Sobic001G500800--Sobic010G196500 Sobic001G381200 Sobic001G381200 Sobic001G500800--Sobic001G381200 Sobic006G213500 Sobic006G213500 Sobic001G500800--Sobic006G213500 Sobic002G001000 Sobic002G001000 Sobic001G500800--Sobic002G001000 Sobic001G500800--Sobic002G187700 Sobic003G403500 Sobic003G403500 Sobic001G500800--Sobic003G403500 Sobic001G500800--Sobic003G302800 Sobic001G500800--Sobic006G175800 Sobic010G196500--Sobic001G488700 Sobic010G196500--Sobic001G500800 Sobic003G086900 Sobic003G086900 Sobic010G196500--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic010G196500--Sobic001G381200 Sobic010G196500--Sobic002G187700 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic006G002300 Sobic006G002300 Sobic002G187700--Sobic006G002300 Sobic003G190400 Sobic003G190400 Sobic002G187700--Sobic003G190400 Sobic004G169000 Sobic004G169000 Sobic002G187700--Sobic004G169000 Sobic004G233200--Sobic001G488700 Sobic010G147100 Sobic010G147100 Sobic004G233200--Sobic010G147100 Sobic002G130800 Sobic002G130800 Sobic004G233200--Sobic002G130800 Sobic004G233200--Sobic008G059100 Sobic001G390800 Sobic001G390800 Sobic004G233200--Sobic001G390800 Sobic004G233200--Sobic002G187700 Sobic002G305000 Sobic002G305000 Sobic004G233200--Sobic002G305000 Sobic001G268200 Sobic001G268200 Sobic004G233200--Sobic001G268200 Sobic004G233200--Sobic004G306500 Sobic006G175800--Sobic010G262500 Sobic006G175800--Sobic004G169000 Sobic006G175800--Sobic002G305000 Sobic006G175800--Sobic002G187700 Sobic006G175800--Sobic001G488700 Sobic006G175800--Sobic003G190400 Sobic003G043300 Sobic003G043300 Sobic006G175800--Sobic003G043300 Sobic006G175800--Sobic001G500800 Sobic006G175800--Sobic010G196500 Sobic003G302800--Sobic008G059100 Sobic003G302800--Sobic002G187700 Sobic003G302800--Sobic001G488700 Sobic006G135600 Sobic006G135600 Sobic003G302800--Sobic006G135600 Sobic003G302800--Sobic001G481900 Sobic003G302800--Sobic001G500800 Sobic003G302800--Sobic001G381200 Sobic003G302800--Sobic007G164000 Sobic003G302800--Sobic004G306500 Sobic001G481900--Sobic002G187700 Sobic001G481900--Sobic004G306500 Sobic001G481900--Sobic003G198800 Sobic003G372500 Sobic003G372500 Sobic001G481900--Sobic003G372500 Sobic001G481900--Sobic010G147100 Sobic001G481900--Sobic003G115900 Sobic001G481900--Sobic008G059100 Sobic001G128300 Sobic001G128300 Sobic001G481900--Sobic001G128300 Sobic001G481900--Sobic007G164000 Sobic003G322700 Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200
Octagon: transcription factors


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