Gene annotation
Transcriptome id Sobic.003G086900.2,Sobic.003G086900.1
Synonym ATSYTF, SYTF, NTMC2T3, NTMC2TYPE3
Functional annotation C2 domain containing protein, putative, expressed
UniProt C5XQW4
Pfam PF00168
Panther DB PTHR10774 PTHR10774:SF1
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G18370 : C2 domain-containing protein
RAP-DB (Rice) LOC_Os01g03820.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a023634
Brachypodium KQK02519 , KQK02520 , KQK02521 , KQK02522 , KQK02523 , PNT69874
Barley HORVU3Hr1G003820.8 , HORVU3Hr1G003820.9 , HORVU3Hr1G003820.2 , HORVU3Hr1G003820.3 , HORVU3Hr1G003820.1 , HORVU3Hr1G003820.6 , HORVU3Hr1G003820.7 , HORVU3Hr1G003820.4 , HORVU3Hr1G003820.5 , HORVU3Hr1G003820.10 , HORVU3Hr1G003820.11 , HORVU3Hr1G003820.12
Wheat TraesCS3D02G037200 , TraesCS3D02G037200 , TraesCS3D02G037200 , TraesCS3A02G043600 , TraesCS3B02G040000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
2 Sobic.006G225900 expressed protein -
3 Sobic.010G196500 zinc-binding protein, putative, expressed -
4 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
5 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
6 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
7 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G422500 expressed protein -
10 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
11 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
12 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
13 Sobic.009G110000 phospholipase D p1, putative, expressed -
14 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
15 Sobic.006G160300 DNA binding protein, putative, expressed -
16 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
17 Sobic.001G289800 BAH domain containing protein, putative, expressed -
18 Sobic.009G161550 - -
19 Sobic.009G191000 MATH domain containing protein, expressed -
20 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family


Gene co-expression network
sample Sobic003G086900 Sobic003G086900 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic010G196500 Sobic010G196500 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic001G390800 Sobic001G390800 Sobic003G086900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic006G225900--Sobic003G086900 Sobic006G225900--Sobic004G174200 Sobic001G375100 Sobic001G375100 Sobic006G225900--Sobic001G375100 Sobic004G291900 Sobic004G291900 Sobic006G225900--Sobic004G291900 Sobic009G110000 Sobic009G110000 Sobic006G225900--Sobic009G110000 Sobic006G225900--Sobic001G390800 Sobic006G225900--Sobic001G268200 Sobic006G225900--Sobic001G016700 Sobic002G411600 Sobic002G411600 Sobic006G225900--Sobic002G411600 Sobic001G488700 Sobic001G488700 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic010G196500--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic002G187700 Sobic002G187700 Sobic010G196500--Sobic002G187700 Sobic004G174200--Sobic004G291900 Sobic004G174200--Sobic002G411600 Sobic008G001200 Sobic008G001200 Sobic004G174200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic004G174200--Sobic010G206900 Sobic002G008900 Sobic002G008900 Sobic004G174200--Sobic002G008900 Sobic001G289800 Sobic001G289800 Sobic004G174200--Sobic001G289800 Sobic005G001000 Sobic005G001000 Sobic004G174200--Sobic005G001000 Sobic004G174200--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic004G174200--Sobic001G194200 Sobic002G430000 Sobic002G430000 Sobic001G016700--Sobic002G430000 Sobic002G111000 Sobic002G111000 Sobic001G016700--Sobic002G111000 Sobic001G207400 Sobic001G207400 Sobic001G016700--Sobic001G207400 Sobic010G139600 Sobic010G139600 Sobic001G016700--Sobic010G139600 Sobic003G110000 Sobic003G110000 Sobic001G016700--Sobic003G110000 Sobic001G016700--Sobic001G390800 Sobic006G204900 Sobic006G204900 Sobic001G016700--Sobic006G204900 Sobic003G322700 Sobic003G322700 Sobic001G016700--Sobic003G322700 Sobic001G016700--Sobic003G086900 Sobic001G390800--Sobic001G268200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic001G268200--Sobic001G390800 Sobic010G013200 Sobic010G013200 Sobic001G268200--Sobic010G013200 Sobic001G268200--Sobic010G147100 Sobic001G268200--Sobic003G313500 Sobic001G268200--Sobic001G121200 Sobic001G268200--Sobic010G139600 Sobic001G268200--Sobic001G085300 Sobic001G268200--Sobic001G194200 Sobic009G053900 Sobic009G053900 Sobic001G268200--Sobic009G053900 Sobic001G121200--Sobic001G390800 Sobic001G121200--Sobic010G205800 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic001G121200--Sobic002G111000 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600
Octagon: transcription factors


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