Gene annotation
Transcriptome id Sobic.001G298700.5,Sobic.001G298700.1,Sobic.001G298700.2,Sobic.001G298700.3,Sobic.001G298700.4
Synonym
Functional annotation -
UniProt A0A1Z5S894 , A0A1B6QLW5 , A0A1Z5S893 , A0A1Z5S889
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
2 Sobic.005G221250 - -
3 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
4 Sobic.003G086900 C2 domain containing protein, putative, expressed -
5 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
6 Sobic.004G131900 - -
7 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
8 Sobic.002G187700 expressed protein -
9 Sobic.010G196500 zinc-binding protein, putative, expressed -
10 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
11 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.005G150350 - -
13 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
14 Sobic.008G187632 - -
15 Sobic.001G053200 expressed protein -
16 Sobic.001G236400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
18 Sobic.009G110000 phospholipase D p1, putative, expressed -
19 Sobic.009G139000 - -
20 Sobic.007G105400 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M


Gene co-expression network
sample Sobic001G298700 Sobic001G298700 Sobic010G262500 Sobic010G262500 Sobic001G298700--Sobic010G262500 Sobic005G221250 Sobic005G221250 Sobic001G298700--Sobic005G221250 Sobic004G233200 Sobic004G233200 Sobic001G298700--Sobic004G233200 Sobic003G086900 Sobic003G086900 Sobic001G298700--Sobic003G086900 Sobic001G488700 Sobic001G488700 Sobic001G298700--Sobic001G488700 Sobic004G131900 Sobic004G131900 Sobic001G298700--Sobic004G131900 Sobic006G175800 Sobic006G175800 Sobic001G298700--Sobic006G175800 Sobic002G187700 Sobic002G187700 Sobic001G298700--Sobic002G187700 Sobic010G196500 Sobic010G196500 Sobic001G298700--Sobic010G196500 Sobic010G262500--Sobic006G175800 Sobic010G262500--Sobic001G298700 Sobic010G262500--Sobic005G221250 Sobic003G331300 Sobic003G331300 Sobic010G262500--Sobic003G331300 Sobic005G150350 Sobic005G150350 Sobic010G262500--Sobic005G150350 Sobic010G013200 Sobic010G013200 Sobic010G262500--Sobic010G013200 Sobic003G112800 Sobic003G112800 Sobic010G262500--Sobic003G112800 Sobic008G059100 Sobic008G059100 Sobic010G262500--Sobic008G059100 Sobic010G262500--Sobic001G488700 Sobic008G187632 Sobic008G187632 Sobic005G221250--Sobic008G187632 Sobic005G221250--Sobic005G150350 Sobic005G221250--Sobic010G262500 Sobic005G221250--Sobic001G298700 Sobic009G139000 Sobic009G139000 Sobic005G221250--Sobic009G139000 Sobic005G182000 Sobic005G182000 Sobic005G221250--Sobic005G182000 Sobic009G161550 Sobic009G161550 Sobic005G221250--Sobic009G161550 Sobic003G160100 Sobic003G160100 Sobic005G221250--Sobic003G160100 Sobic003G061200 Sobic003G061200 Sobic005G221250--Sobic003G061200 Sobic004G233200--Sobic001G488700 Sobic010G147100 Sobic010G147100 Sobic004G233200--Sobic010G147100 Sobic002G130800 Sobic002G130800 Sobic004G233200--Sobic002G130800 Sobic004G233200--Sobic008G059100 Sobic001G390800 Sobic001G390800 Sobic004G233200--Sobic001G390800 Sobic004G233200--Sobic002G187700 Sobic002G305000 Sobic002G305000 Sobic004G233200--Sobic002G305000 Sobic001G268200 Sobic001G268200 Sobic004G233200--Sobic001G268200 Sobic004G306500 Sobic004G306500 Sobic004G233200--Sobic004G306500 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic003G086900--Sobic001G390800 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic001G488700--Sobic008G059100 Sobic001G500800 Sobic001G500800 Sobic001G488700--Sobic001G500800 Sobic001G488700--Sobic010G196500 Sobic001G488700--Sobic002G187700 Sobic001G488700--Sobic004G233200 Sobic001G488700--Sobic006G175800 Sobic003G302800 Sobic003G302800 Sobic001G488700--Sobic003G302800 Sobic001G481900 Sobic001G481900 Sobic001G488700--Sobic001G481900 Sobic002G266000 Sobic002G266000 Sobic001G488700--Sobic002G266000 Sobic004G131900--Sobic001G298700 Sobic003G002600 Sobic003G002600 Sobic004G131900--Sobic003G002600 Sobic004G131900--Sobic010G262500 Sobic004G131900--Sobic006G175800 Sobic003G403500 Sobic003G403500 Sobic004G131900--Sobic003G403500 Sobic004G131900--Sobic001G500800 Sobic004G131900--Sobic010G196500 Sobic004G131900--Sobic001G488700 Sobic007G105400 Sobic007G105400 Sobic004G131900--Sobic007G105400 Sobic006G175800--Sobic010G262500 Sobic004G169000 Sobic004G169000 Sobic006G175800--Sobic004G169000 Sobic006G175800--Sobic002G305000 Sobic006G175800--Sobic002G187700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic003G043300 Sobic003G043300 Sobic006G175800--Sobic003G043300 Sobic006G175800--Sobic001G500800 Sobic006G175800--Sobic010G196500 Sobic002G187700--Sobic001G481900 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic006G002300 Sobic006G002300 Sobic002G187700--Sobic006G002300 Sobic002G187700--Sobic003G190400 Sobic002G187700--Sobic004G169000 Sobic010G196500--Sobic001G488700 Sobic010G196500--Sobic001G500800 Sobic010G196500--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic010G196500--Sobic002G187700
Octagon: transcription factors


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