Gene annotation
Transcriptome id Sobic.004G034600.1
Synonym Sb04g002990, CRN1, PPH
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XTZ0
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF879
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13800 : pheophytinase
RAP-DB (Rice) LOC_Os06g24730.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018916
Brachypodium KQK17635 , KQK17632 , KQK17633 , KQK17631
Barley HORVU7Hr1G083370.7 , HORVU7Hr1G083370.2 , HORVU7Hr1G083370.3 , HORVU7Hr1G083370.4 , HORVU7Hr1G083370.1 , HORVU7Hr1G083370.6 , HORVU7Hr1G083370.8 , HORVU7Hr1G083370.9 , HORVU7Hr1G083370.5
Wheat TraesCS7B02G250200 , TraesCS7B02G250200 , TraesCS7A02G338900 , TraesCS7A02G338900 , TraesCS7D02G346100
Populus -


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cDNA sequences
Sobic.004G034600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
3 Sobic.001G517800 NIN, putative, expressed -
4 Sobic.009G011600 expressed protein -
5 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
6 Sobic.001G459600 expressed protein -
7 Sobic.003G322700 expressed protein -
8 Sobic.001G223550 - -
9 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
10 Sobic.007G084300 kelch repeat protein, putative, expressed -
11 Sobic.004G070500 expressed protein -
12 Sobic.003G174301 - -
13 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
14 Sobic.001G053200 expressed protein -
15 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
16 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
17 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
18 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
19 Sobic.001G496100 - -
20 Sobic.001G000501 - -


Gene co-expression network
sample Sobic004G034600 Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic002G249300 Sobic002G249300 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic009G207600 Sobic009G207600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic003G398100 Sobic003G398100 Sobic005G149700--Sobic003G398100 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic001G517800--Sobic001G459600 Sobic003G301900 Sobic003G301900 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic009G011600--Sobic001G496100 Sobic009G011600--Sobic005G149700 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic009G011600--Sobic002G249300 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic001G459600--Sobic001G517800 Sobic001G000501 Sobic001G000501 Sobic001G459600--Sobic001G000501 Sobic001G459600--Sobic004G034600 Sobic001G000700 Sobic001G000700 Sobic001G459600--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic001G459600--Sobic002G418800 Sobic008G084300 Sobic008G084300 Sobic001G459600--Sobic008G084300 Sobic008G166550 Sobic008G166550 Sobic001G459600--Sobic008G166550 Sobic001G459600--Sobic001G223550 Sobic005G133600 Sobic005G133600 Sobic001G459600--Sobic005G133600 Sobic003G322700--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic001G223550--Sobic004G034600 Sobic001G223550--Sobic002G249300 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G223550--Sobic001G459600 Sobic004G261900--Sobic001G504900 Sobic004G261900--Sobic002G266000 Sobic004G261900--Sobic004G034600 Sobic004G261900--Sobic003G322700 Sobic004G261900--Sobic003G398100 Sobic004G261900--Sobic004G225200 Sobic004G261900--Sobic005G149700 Sobic004G261900--Sobic009G207600 Sobic004G261900--Sobic001G517800
Octagon: transcription factors


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