Gene annotation
Transcriptome id Sobic.002G249300.1
Synonym Sb02g028520
Functional annotation auxin efflux carrier component, putative, expressed
UniProt C5X4G8
Pfam PF03547
Panther DB PTHR31651 PTHR31651:SF5
NCBI CDD KOG2722; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G20925 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os09g31478.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a047462
Brachypodium KQJ90777 , KQJ90776 , KQJ90741
Barley HORVU5Hr1G073670.4 , HORVU5Hr1G073670.5 , HORVU5Hr1G073670.2 , HORVU5Hr1G073670.3 , HORVU5Hr1G073670.1 , HORVU5Hr1G073630.2 , HORVU5Hr1G073630.3 , HORVU5Hr1G073630.1 , HORVU5Hr1G073630.4 , HORVU5Hr1G073630.5
Wheat TraesCS5B02G267800
Populus -


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cDNA sequences
Sobic.002G249300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G174301 - -
3 Sobic.001G223550 - -
4 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.009G011600 expressed protein -
6 Sobic.001G233300 - -
7 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
8 Sobic.001G496100 - -
9 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
10 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
11 Sobic.004G070500 expressed protein -
12 Sobic.007G084300 kelch repeat protein, putative, expressed -
13 Sobic.001G176501 - -
14 Sobic.001G053200 expressed protein -
15 Sobic.001G000501 - -
16 Sobic.003G174400 - -
17 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
18 Sobic.001G459600 expressed protein -
19 Sobic.001G517800 NIN, putative, expressed -
20 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic002G249300 Sobic002G249300 Sobic004G034600 Sobic004G034600 Sobic002G249300--Sobic004G034600 Sobic003G174301 Sobic003G174301 Sobic002G249300--Sobic003G174301 Sobic001G223550 Sobic001G223550 Sobic002G249300--Sobic001G223550 Sobic005G149700 Sobic005G149700 Sobic002G249300--Sobic005G149700 Sobic009G011600 Sobic009G011600 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic003G174301--Sobic002G249300 Sobic003G174301--Sobic004G034600 Sobic003G174301--Sobic005G149700 Sobic005G053200 Sobic005G053200 Sobic003G174301--Sobic005G053200 Sobic003G174301--Sobic009G011600 Sobic001G053200 Sobic001G053200 Sobic003G174301--Sobic001G053200 Sobic004G070500 Sobic004G070500 Sobic003G174301--Sobic004G070500 Sobic003G174301--Sobic001G252000 Sobic001G176501 Sobic001G176501 Sobic003G174301--Sobic001G176501 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic001G223550--Sobic004G034600 Sobic001G223550--Sobic002G249300 Sobic005G133600 Sobic005G133600 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G223550--Sobic001G459600 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic009G207600 Sobic009G207600 Sobic005G149700--Sobic009G207600 Sobic005G149700--Sobic003G174301 Sobic003G398100 Sobic003G398100 Sobic005G149700--Sobic003G398100 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic009G011600--Sobic001G496100 Sobic009G011600--Sobic005G149700 Sobic010G020800 Sobic010G020800 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic002G153200 Sobic002G153200 Sobic001G233300--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G233300--Sobic002G143766 Sobic001G233300--Sobic001G223550 Sobic001G233300--Sobic002G249300 Sobic001G542150 Sobic001G542150 Sobic001G233300--Sobic001G542150 Sobic001G233300--Sobic010G145500 Sobic001G233300--Sobic004G034600 Sobic001G233300--Sobic005G149700 Sobic001G000501 Sobic001G000501 Sobic001G233300--Sobic001G000501 Sobic001G252000--Sobic004G034600 Sobic001G252000--Sobic002G249300 Sobic009G019100 Sobic009G019100 Sobic001G252000--Sobic009G019100 Sobic001G252000--Sobic009G011600 Sobic001G252000--Sobic003G174301 Sobic008G081900 Sobic008G081900 Sobic001G252000--Sobic008G081900 Sobic007G084300 Sobic007G084300 Sobic001G252000--Sobic007G084300 Sobic009G213800 Sobic009G213800 Sobic001G252000--Sobic009G213800 Sobic004G131040 Sobic004G131040 Sobic001G252000--Sobic004G131040 Sobic001G496100--Sobic003G398100 Sobic001G496100--Sobic009G207600 Sobic001G496100--Sobic009G011600 Sobic009G006400 Sobic009G006400 Sobic001G496100--Sobic009G006400 Sobic006G199000 Sobic006G199000 Sobic001G496100--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G496100--Sobic004G225200 Sobic001G496100--Sobic002G266000 Sobic001G496100--Sobic005G149700 Sobic008G153400 Sobic008G153400 Sobic001G496100--Sobic008G153400 Sobic007G010700--Sobic004G070500 Sobic007G010700--Sobic005G053200 Sobic007G010700--Sobic001G000501 Sobic004G253700 Sobic004G253700 Sobic007G010700--Sobic004G253700 Sobic007G010700--Sobic004G034600 Sobic007G010700--Sobic005G133600 Sobic003G061200 Sobic003G061200 Sobic007G010700--Sobic003G061200 Sobic007G010700--Sobic002G249300 Sobic007G010700--Sobic005G089400
Octagon: transcription factors


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