Gene annotation
Transcriptome id Sobic.009G016600.1
Synonym ATMYB48-2, ATMYB48-3, ATMYB48, Sb09g001590, ATMYB48-1, MYB48
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YYM1
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF591
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46130 : myb domain protein 48
RAP-DB (Rice) LOC_Os05g02420.2 : expressed protein
MaizeGDB (Corn) Zm00025a054415 , Zm00025a033716 , Zm00025a035541 , Zm00025a055299 , Zm00025a004957 , Zm00025a015471 , Zm00025a040887 , Zm00025a040888 , Zm00025a002214
Brachypodium KQJ86560 , KQK01840
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU1Hr1G089770.1 , HORVU6Hr1G078300.1 , HORVU6Hr1G078300.2 , HORVU6Hr1G078300.3 , HORVU1Hr1G089770.2
Wheat TraesCS3D02G540600 , TraesCS1A02G406600 , TraesCS6D02G298100 , TraesCS6D02G298100 , TraesCS3B02G224500 , TraesCS3A02G535100 , TraesCS1B02G055200 , TraesCS1D02G415000 , TraesCS6B02G349100 , TraesCS5B02G105900 , TraesCS4A02G124900 , TraesCS5D02G113300 , TraesCS3A02G200300 , TraesCS5A02G101000 , TraesCS6A02G318900
Populus -


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cDNA sequences
Sobic.009G016600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G192800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.007G084300 kelch repeat protein, putative, expressed -
3 Sobic.009G211000 phosphotransferase, putative, expressed K14156: choline/ethanolamine kinase
4 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
5 Sobic.002G165140 - K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
6 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
7 Sobic.007G063300 reductase, putative, expressed -
8 Sobic.003G174301 - -
9 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
10 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
11 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
12 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
13 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.003G404200 expressed protein -
15 Sobic.003G086900 C2 domain containing protein, putative, expressed -
16 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
17 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
18 Sobic.003G322700 expressed protein -
19 Sobic.002G140700 triacylglycerol lipase 1 precursor, putative, expressed -
20 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)


Gene co-expression network
sample Sobic009G016600 Sobic009G016600 Sobic010G192800 Sobic010G192800 Sobic009G016600--Sobic010G192800 Sobic007G084300 Sobic007G084300 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic002G249300 Sobic002G249300 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic006G143000 Sobic006G143000 Sobic009G016600--Sobic006G143000 Sobic007G063300 Sobic007G063300 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G226600 Sobic009G226600 Sobic009G016600--Sobic009G226600 Sobic010G192800--Sobic009G016600 Sobic001G351800 Sobic001G351800 Sobic010G192800--Sobic001G351800 Sobic003G404200 Sobic003G404200 Sobic010G192800--Sobic003G404200 Sobic010G192800--Sobic007G063300 Sobic002G338100 Sobic002G338100 Sobic010G192800--Sobic002G338100 Sobic009G034700 Sobic009G034700 Sobic010G192800--Sobic009G034700 Sobic001G469500 Sobic001G469500 Sobic010G192800--Sobic001G469500 Sobic003G365000 Sobic003G365000 Sobic010G192800--Sobic003G365000 Sobic003G388251 Sobic003G388251 Sobic010G192800--Sobic003G388251 Sobic006G030600 Sobic006G030600 Sobic007G084300--Sobic006G030600 Sobic007G084300--Sobic006G143000 Sobic010G196500 Sobic010G196500 Sobic007G084300--Sobic010G196500 Sobic004G034600 Sobic004G034600 Sobic007G084300--Sobic004G034600 Sobic002G373100 Sobic002G373100 Sobic007G084300--Sobic002G373100 Sobic003G086900 Sobic003G086900 Sobic007G084300--Sobic003G086900 Sobic007G084300--Sobic009G016600 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic002G169900 Sobic002G169900 Sobic009G211000--Sobic002G169900 Sobic009G211000--Sobic009G016600 Sobic001G048766 Sobic001G048766 Sobic009G211000--Sobic001G048766 Sobic009G006400 Sobic009G006400 Sobic009G211000--Sobic009G006400 Sobic002G140700 Sobic002G140700 Sobic009G211000--Sobic002G140700 Sobic002G032700 Sobic002G032700 Sobic009G211000--Sobic002G032700 Sobic001G073500 Sobic001G073500 Sobic009G211000--Sobic001G073500 Sobic004G153501 Sobic004G153501 Sobic009G211000--Sobic004G153501 Sobic004G266400 Sobic004G266400 Sobic009G211000--Sobic004G266400 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic001G223550 Sobic001G223550 Sobic002G249300--Sobic001G223550 Sobic005G149700 Sobic005G149700 Sobic002G249300--Sobic005G149700 Sobic009G011600 Sobic009G011600 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic002G165140--Sobic007G063300 Sobic002G165140--Sobic004G266400 Sobic001G016700 Sobic001G016700 Sobic002G165140--Sobic001G016700 Sobic002G165140--Sobic009G016600 Sobic008G159250 Sobic008G159250 Sobic002G165140--Sobic008G159250 Sobic006G204900 Sobic006G204900 Sobic002G165140--Sobic006G204900 Sobic003G109100 Sobic003G109100 Sobic002G165140--Sobic003G109100 Sobic004G329400 Sobic004G329400 Sobic002G165140--Sobic004G329400 Sobic010G001500 Sobic010G001500 Sobic002G165140--Sobic010G001500 Sobic006G143000--Sobic007G084300 Sobic006G143000--Sobic009G016600 Sobic006G143000--Sobic003G086900 Sobic006G143000--Sobic006G030600 Sobic006G143000--Sobic002G373100 Sobic006G143000--Sobic010G196500 Sobic006G143000--Sobic007G063300 Sobic004G059300 Sobic004G059300 Sobic006G143000--Sobic004G059300 Sobic008G146900 Sobic008G146900 Sobic006G143000--Sobic008G146900 Sobic007G063300--Sobic002G165140 Sobic007G063300--Sobic010G192800 Sobic007G063300--Sobic009G016600 Sobic007G063300--Sobic001G016700 Sobic007G063300--Sobic006G143000 Sobic007G063300--Sobic004G059300 Sobic007G063300--Sobic002G249300 Sobic007G063300--Sobic007G084300 Sobic007G063300--Sobic003G404200 Sobic003G174301--Sobic002G249300 Sobic003G174301--Sobic004G034600 Sobic003G174301--Sobic005G149700 Sobic005G053200 Sobic005G053200 Sobic003G174301--Sobic005G053200 Sobic003G174301--Sobic009G011600 Sobic001G053200 Sobic001G053200 Sobic003G174301--Sobic001G053200 Sobic004G070500 Sobic004G070500 Sobic003G174301--Sobic004G070500 Sobic003G174301--Sobic001G252000 Sobic001G176501 Sobic001G176501 Sobic003G174301--Sobic001G176501 Sobic008G079300 Sobic008G079300 Sobic009G226600--Sobic008G079300 Sobic002G087800 Sobic002G087800 Sobic009G226600--Sobic002G087800 Sobic009G207600 Sobic009G207600 Sobic009G226600--Sobic009G207600 Sobic001G474500 Sobic001G474500 Sobic009G226600--Sobic001G474500 Sobic008G182700 Sobic008G182700 Sobic009G226600--Sobic008G182700 Sobic003G184900 Sobic003G184900 Sobic009G226600--Sobic003G184900 Sobic002G324000 Sobic002G324000 Sobic009G226600--Sobic002G324000 Sobic006G181300 Sobic006G181300 Sobic009G226600--Sobic006G181300 Sobic001G359500 Sobic001G359500 Sobic009G226600--Sobic001G359500
Octagon: transcription factors


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