Gene annotation
Transcriptome id Sobic.006G143000.1
Synonym Sb06g022220
Functional annotation enzyme of the cupin superfamily protein, putative, expressed
UniProt A0A1B6PM03
Pfam PF05899
Panther DB PTHR33271 PTHR33271:SF5
NCBI CDD -
KEGG Orthology K06995; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10300 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os04g43060.1 : enzyme of the cupin superfamily protein, putative, expressed
MaizeGDB (Corn) Zm00025a021131 , Zm00025a017678 , Zm00025a031998 , Zm00025a010661
Brachypodium KQK00373 , KQJ83513 , PNT61451
Barley HORVU0Hr1G016180.1 , HORVU0Hr1G016180.2 , HORVU0Hr1G016180.3
Wheat TraesCS6D02G208100 , TraesCS6A02G226900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G084300 kelch repeat protein, putative, expressed -
2 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G086900 C2 domain containing protein, putative, expressed -
4 Sobic.006G030600 xa21, putative, expressed -
5 Sobic.002G373100 strictosidine synthase, putative, expressed -
6 Sobic.010G196500 zinc-binding protein, putative, expressed -
7 Sobic.007G063300 reductase, putative, expressed -
8 Sobic.004G059300 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
9 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
10 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
11 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
12 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
13 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
14 Sobic.004G044900 DNA binding protein, putative, expressed -
15 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
16 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
17 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.008G022300 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
19 Sobic.003G413500 expressed protein -
20 Sobic.003G069500 regulator of ribonuclease, putative, expressed -


Gene co-expression network
sample Sobic006G143000 Sobic006G143000 Sobic007G084300 Sobic007G084300 Sobic006G143000--Sobic007G084300 Sobic009G016600 Sobic009G016600 Sobic006G143000--Sobic009G016600 Sobic003G086900 Sobic003G086900 Sobic006G143000--Sobic003G086900 Sobic006G030600 Sobic006G030600 Sobic006G143000--Sobic006G030600 Sobic002G373100 Sobic002G373100 Sobic006G143000--Sobic002G373100 Sobic010G196500 Sobic010G196500 Sobic006G143000--Sobic010G196500 Sobic007G063300 Sobic007G063300 Sobic006G143000--Sobic007G063300 Sobic004G059300 Sobic004G059300 Sobic006G143000--Sobic004G059300 Sobic008G146900 Sobic008G146900 Sobic006G143000--Sobic008G146900 Sobic007G084300--Sobic006G030600 Sobic007G084300--Sobic006G143000 Sobic007G084300--Sobic010G196500 Sobic004G034600 Sobic004G034600 Sobic007G084300--Sobic004G034600 Sobic007G084300--Sobic002G373100 Sobic007G084300--Sobic003G086900 Sobic007G084300--Sobic009G016600 Sobic002G249300 Sobic002G249300 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic010G192800 Sobic010G192800 Sobic009G016600--Sobic010G192800 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic009G016600--Sobic006G143000 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G226600 Sobic009G226600 Sobic009G016600--Sobic009G226600 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic001G390800 Sobic001G390800 Sobic003G086900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic006G030600--Sobic007G084300 Sobic006G030600--Sobic004G034600 Sobic006G030600--Sobic007G193700 Sobic004G131040 Sobic004G131040 Sobic006G030600--Sobic004G131040 Sobic006G030600--Sobic010G196500 Sobic006G030600--Sobic003G086900 Sobic006G030600--Sobic002G193100 Sobic006G030600--Sobic006G143000 Sobic002G181300 Sobic002G181300 Sobic006G030600--Sobic002G181300 Sobic002G373100--Sobic007G084300 Sobic008G027200 Sobic008G027200 Sobic002G373100--Sobic008G027200 Sobic002G373100--Sobic006G143000 Sobic002G373100--Sobic003G086900 Sobic002G373100--Sobic010G196500 Sobic006G213500 Sobic006G213500 Sobic002G373100--Sobic006G213500 Sobic002G273700 Sobic002G273700 Sobic002G373100--Sobic002G273700 Sobic009G082000 Sobic009G082000 Sobic002G373100--Sobic009G082000 Sobic003G308700 Sobic003G308700 Sobic002G373100--Sobic003G308700 Sobic001G488700 Sobic001G488700 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic010G196500--Sobic003G086900 Sobic010G196500--Sobic002G193100 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic002G187700 Sobic002G187700 Sobic010G196500--Sobic002G187700 Sobic007G063300--Sobic002G165140 Sobic007G063300--Sobic010G192800 Sobic007G063300--Sobic009G016600 Sobic007G063300--Sobic001G016700 Sobic007G063300--Sobic006G143000 Sobic007G063300--Sobic004G059300 Sobic007G063300--Sobic002G249300 Sobic007G063300--Sobic007G084300 Sobic003G404200 Sobic003G404200 Sobic007G063300--Sobic003G404200 Sobic004G059300--Sobic007G063300 Sobic004G059300--Sobic006G143000 Sobic004G059300--Sobic007G084300 Sobic001G190300 Sobic001G190300 Sobic004G059300--Sobic001G190300 Sobic004G059300--Sobic001G016700 Sobic001G248300 Sobic001G248300 Sobic004G059300--Sobic001G248300 Sobic004G059300--Sobic003G086900 Sobic004G059300--Sobic006G030600 Sobic007G165600 Sobic007G165600 Sobic004G059300--Sobic007G165600 Sobic010G184600 Sobic010G184600 Sobic008G146900--Sobic010G184600 Sobic002G276100 Sobic002G276100 Sobic008G146900--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic008G146900--Sobic001G159400 Sobic008G146900--Sobic010G196500 Sobic004G181700 Sobic004G181700 Sobic008G146900--Sobic004G181700 Sobic008G144800 Sobic008G144800 Sobic008G146900--Sobic008G144800 Sobic004G189900 Sobic004G189900 Sobic008G146900--Sobic004G189900 Sobic008G146900--Sobic002G193100 Sobic003G014300 Sobic003G014300 Sobic008G146900--Sobic003G014300
Octagon: transcription factors


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