Gene annotation
Transcriptome id Sobic.004G044900.2
Synonym
Functional annotation DNA binding protein, putative, expressed
UniProt C5XVA6
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF313
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41220 : glutathione S-transferase THETA 3
RAP-DB (Rice) LOC_Os11g14160.1 : transposon protein, putative, Pong sub-class, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G044900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G038800 OsFBX188 - F-box domain containing protein, expressed -
2 Sobic.006G072601 - -
3 Sobic.002G118101 - -
4 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
5 Sobic.004G010151 - -
6 Sobic.001G214100 expressed protein -
7 Sobic.007G084300 kelch repeat protein, putative, expressed -
8 Sobic.007G198400 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.004G059300 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
10 Sobic.008G105366 - -
11 Sobic.003G086900 C2 domain containing protein, putative, expressed -
12 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
13 Sobic.003G238700 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.002G103100 - -
15 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
16 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
17 Sobic.001G303100 expressed protein -
18 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
19 Sobic.009G121400 - -
20 Sobic.004G230700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -


Gene co-expression network
sample Sobic004G044900 Sobic004G044900 Sobic004G038800 Sobic004G038800 Sobic004G044900--Sobic004G038800 Sobic006G072601 Sobic006G072601 Sobic004G044900--Sobic006G072601 Sobic002G118101 Sobic002G118101 Sobic004G044900--Sobic002G118101 Sobic006G143000 Sobic006G143000 Sobic004G044900--Sobic006G143000 Sobic004G010151 Sobic004G010151 Sobic004G044900--Sobic004G010151 Sobic001G214100 Sobic001G214100 Sobic004G044900--Sobic001G214100 Sobic007G084300 Sobic007G084300 Sobic004G044900--Sobic007G084300 Sobic007G198400 Sobic007G198400 Sobic004G044900--Sobic007G198400 Sobic004G059300 Sobic004G059300 Sobic004G044900--Sobic004G059300 Sobic004G038800--Sobic006G072601 Sobic002G115050 Sobic002G115050 Sobic004G038800--Sobic002G115050 Sobic001G303100 Sobic001G303100 Sobic004G038800--Sobic001G303100 Sobic010G131700 Sobic010G131700 Sobic004G038800--Sobic010G131700 Sobic002G115075 Sobic002G115075 Sobic004G038800--Sobic002G115075 Sobic001G381600 Sobic001G381600 Sobic004G038800--Sobic001G381600 Sobic010G033100 Sobic010G033100 Sobic004G038800--Sobic010G033100 Sobic004G038800--Sobic007G198400 Sobic007G106800 Sobic007G106800 Sobic004G038800--Sobic007G106800 Sobic006G072601--Sobic004G038800 Sobic001G333300 Sobic001G333300 Sobic006G072601--Sobic001G333300 Sobic009G121400 Sobic009G121400 Sobic006G072601--Sobic009G121400 Sobic006G072601--Sobic002G115075 Sobic004G113000 Sobic004G113000 Sobic006G072601--Sobic004G113000 Sobic006G072601--Sobic007G198400 Sobic008G105366 Sobic008G105366 Sobic006G072601--Sobic008G105366 Sobic003G416000 Sobic003G416000 Sobic006G072601--Sobic003G416000 Sobic005G007000 Sobic005G007000 Sobic006G072601--Sobic005G007000 Sobic001G053200 Sobic001G053200 Sobic002G118101--Sobic001G053200 Sobic002G321800 Sobic002G321800 Sobic002G118101--Sobic002G321800 Sobic008G089800 Sobic008G089800 Sobic002G118101--Sobic008G089800 Sobic008G027200 Sobic008G027200 Sobic002G118101--Sobic008G027200 Sobic002G118101--Sobic004G044900 Sobic002G118101--Sobic007G084300 Sobic003G080800 Sobic003G080800 Sobic002G118101--Sobic003G080800 Sobic002G017500 Sobic002G017500 Sobic002G118101--Sobic002G017500 Sobic001G413000 Sobic001G413000 Sobic002G118101--Sobic001G413000 Sobic006G143000--Sobic007G084300 Sobic009G016600 Sobic009G016600 Sobic006G143000--Sobic009G016600 Sobic003G086900 Sobic003G086900 Sobic006G143000--Sobic003G086900 Sobic006G030600 Sobic006G030600 Sobic006G143000--Sobic006G030600 Sobic002G373100 Sobic002G373100 Sobic006G143000--Sobic002G373100 Sobic010G196500 Sobic010G196500 Sobic006G143000--Sobic010G196500 Sobic007G063300 Sobic007G063300 Sobic006G143000--Sobic007G063300 Sobic006G143000--Sobic004G059300 Sobic008G146900 Sobic008G146900 Sobic006G143000--Sobic008G146900 Sobic005G110300 Sobic005G110300 Sobic004G010151--Sobic005G110300 Sobic007G116200 Sobic007G116200 Sobic004G010151--Sobic007G116200 Sobic005G110200 Sobic005G110200 Sobic004G010151--Sobic005G110200 Sobic004G174200 Sobic004G174200 Sobic004G010151--Sobic004G174200 Sobic002G008900 Sobic002G008900 Sobic004G010151--Sobic002G008900 Sobic004G127400 Sobic004G127400 Sobic004G010151--Sobic004G127400 Sobic001G071400 Sobic001G071400 Sobic004G010151--Sobic001G071400 Sobic009G191000 Sobic009G191000 Sobic004G010151--Sobic009G191000 Sobic001G111850 Sobic001G111850 Sobic004G010151--Sobic001G111850 Sobic001G481900 Sobic001G481900 Sobic001G214100--Sobic001G481900 Sobic006G275100 Sobic006G275100 Sobic001G214100--Sobic006G275100 Sobic001G214100--Sobic007G106800 Sobic006G002300 Sobic006G002300 Sobic001G214100--Sobic006G002300 Sobic004G169000 Sobic004G169000 Sobic001G214100--Sobic004G169000 Sobic008G151100 Sobic008G151100 Sobic001G214100--Sobic008G151100 Sobic003G115900 Sobic003G115900 Sobic001G214100--Sobic003G115900 Sobic003G198800 Sobic003G198800 Sobic001G214100--Sobic003G198800 Sobic006G257800 Sobic006G257800 Sobic001G214100--Sobic006G257800 Sobic007G084300--Sobic006G030600 Sobic007G084300--Sobic006G143000 Sobic007G084300--Sobic010G196500 Sobic004G034600 Sobic004G034600 Sobic007G084300--Sobic004G034600 Sobic007G084300--Sobic002G373100 Sobic007G084300--Sobic003G086900 Sobic007G084300--Sobic009G016600 Sobic002G249300 Sobic002G249300 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic007G141380 Sobic007G141380 Sobic007G198400--Sobic007G141380 Sobic001G227900 Sobic001G227900 Sobic007G198400--Sobic001G227900 Sobic004G230700 Sobic004G230700 Sobic007G198400--Sobic004G230700 Sobic007G198400--Sobic006G072601 Sobic007G198400--Sobic004G038800 Sobic007G198400--Sobic008G105366 Sobic007G202300 Sobic007G202300 Sobic007G198400--Sobic007G202300 Sobic007G198400--Sobic002G017500 Sobic007G198400--Sobic003G416000 Sobic004G059300--Sobic007G063300 Sobic004G059300--Sobic006G143000 Sobic004G059300--Sobic007G084300 Sobic001G190300 Sobic001G190300 Sobic004G059300--Sobic001G190300 Sobic001G016700 Sobic001G016700 Sobic004G059300--Sobic001G016700 Sobic001G248300 Sobic001G248300 Sobic004G059300--Sobic001G248300 Sobic004G059300--Sobic003G086900 Sobic004G059300--Sobic006G030600 Sobic007G165600 Sobic007G165600 Sobic004G059300--Sobic007G165600
Octagon: transcription factors


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