Gene annotation
Transcriptome id Sobic.001G214100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QK53
Pfam -
Panther DB PTHR37706 PTHR37706:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15780 : -
RAP-DB (Rice) LOC_Os01g29740.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK04420
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G481900 SAC domain containing protein, putative, expressed -
2 Sobic.006G275100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
3 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
4 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
6 Sobic.008G151100 protein kinase domain containing protein, expressed -
7 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
8 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
9 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
10 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
11 Sobic.002G187700 expressed protein -
12 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
13 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
14 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
15 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
16 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
17 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
18 Sobic.003G247500 expressed protein -
19 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
20 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G214100 Sobic001G214100 Sobic001G481900 Sobic001G481900 Sobic001G214100--Sobic001G481900 Sobic006G275100 Sobic006G275100 Sobic001G214100--Sobic006G275100 Sobic007G106800 Sobic007G106800 Sobic001G214100--Sobic007G106800 Sobic006G002300 Sobic006G002300 Sobic001G214100--Sobic006G002300 Sobic004G169000 Sobic004G169000 Sobic001G214100--Sobic004G169000 Sobic008G151100 Sobic008G151100 Sobic001G214100--Sobic008G151100 Sobic003G115900 Sobic003G115900 Sobic001G214100--Sobic003G115900 Sobic003G198800 Sobic003G198800 Sobic001G214100--Sobic003G198800 Sobic006G257800 Sobic006G257800 Sobic001G214100--Sobic006G257800 Sobic002G187700 Sobic002G187700 Sobic001G481900--Sobic002G187700 Sobic004G306500 Sobic004G306500 Sobic001G481900--Sobic004G306500 Sobic001G481900--Sobic003G198800 Sobic003G372500 Sobic003G372500 Sobic001G481900--Sobic003G372500 Sobic010G147100 Sobic010G147100 Sobic001G481900--Sobic010G147100 Sobic001G481900--Sobic003G115900 Sobic008G059100 Sobic008G059100 Sobic001G481900--Sobic008G059100 Sobic001G128300 Sobic001G128300 Sobic001G481900--Sobic001G128300 Sobic007G164000 Sobic007G164000 Sobic001G481900--Sobic007G164000 Sobic010G227100 Sobic010G227100 Sobic006G275100--Sobic010G227100 Sobic006G275100--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic006G275100--Sobic001G062300 Sobic002G383600 Sobic002G383600 Sobic006G275100--Sobic002G383600 Sobic004G189200 Sobic004G189200 Sobic006G275100--Sobic004G189200 Sobic006G275100--Sobic003G372500 Sobic006G275100--Sobic003G198800 Sobic006G275100--Sobic001G481900 Sobic006G275100--Sobic001G214100 Sobic003G191700 Sobic003G191700 Sobic007G106800--Sobic003G191700 Sobic006G133900 Sobic006G133900 Sobic007G106800--Sobic006G133900 Sobic003G155100 Sobic003G155100 Sobic007G106800--Sobic003G155100 Sobic001G375100 Sobic001G375100 Sobic007G106800--Sobic001G375100 Sobic001G454500 Sobic001G454500 Sobic007G106800--Sobic001G454500 Sobic004G174200 Sobic004G174200 Sobic007G106800--Sobic004G174200 Sobic006G065600 Sobic006G065600 Sobic007G106800--Sobic006G065600 Sobic008G001200 Sobic008G001200 Sobic007G106800--Sobic008G001200 Sobic007G106800--Sobic003G198800 Sobic006G002300--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic006G002300--Sobic001G381600 Sobic006G002300--Sobic002G187700 Sobic006G002300--Sobic003G115900 Sobic002G128200 Sobic002G128200 Sobic006G002300--Sobic002G128200 Sobic007G198300 Sobic007G198300 Sobic006G002300--Sobic007G198300 Sobic003G301900 Sobic003G301900 Sobic006G002300--Sobic003G301900 Sobic003G229300 Sobic003G229300 Sobic006G002300--Sobic003G229300 Sobic006G002300--Sobic001G375100 Sobic001G352400 Sobic001G352400 Sobic004G169000--Sobic001G352400 Sobic002G341000 Sobic002G341000 Sobic004G169000--Sobic002G341000 Sobic001G333800 Sobic001G333800 Sobic004G169000--Sobic001G333800 Sobic004G281800 Sobic004G281800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic005G106600 Sobic005G106600 Sobic004G169000--Sobic005G106600 Sobic008G151100--Sobic003G198800 Sobic008G151100--Sobic001G381600 Sobic001G212300 Sobic001G212300 Sobic008G151100--Sobic001G212300 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic005G045000 Sobic005G045000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic008G151100--Sobic003G229300 Sobic008G151100--Sobic007G198300 Sobic003G115900--Sobic002G187700 Sobic003G115900--Sobic003G198800 Sobic003G115900--Sobic001G381600 Sobic003G115900--Sobic006G002300 Sobic004G091100 Sobic004G091100 Sobic003G115900--Sobic004G091100 Sobic009G074400 Sobic009G074400 Sobic003G115900--Sobic009G074400 Sobic003G115900--Sobic001G481900 Sobic001G107600 Sobic001G107600 Sobic003G115900--Sobic001G107600 Sobic010G139600 Sobic010G139600 Sobic003G115900--Sobic010G139600 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic003G198800--Sobic006G257800 Sobic003G198800--Sobic003G155100 Sobic003G198800--Sobic001G128300 Sobic003G198800--Sobic001G481900 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic008G167600 Sobic008G167600 Sobic006G257800--Sobic008G167600 Sobic006G257800--Sobic004G189200 Sobic006G257800--Sobic003G198800 Sobic006G257800--Sobic002G383600 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G051800 Sobic006G051800 Sobic006G257800--Sobic006G051800 Sobic006G257800--Sobic002G341000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.