Gene annotation
Transcriptome id Sobic.010G019000.1,Sobic.010G019000.2
Synonym Sb10g001840
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized membrane protein, putative, expressed
UniProt A0A194YGT7 , A0A194YGU8
Pfam PF03105 PF07690
Panther DB PTHR23510 PTHR23510:SF19
NCBI CDD KOG2325; Predicted transporter/transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G22990 : Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
RAP-DB (Rice) LOC_Os06g03860.1 : uncharacterized membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a041359 , Zm00025a050189
Brachypodium PNT76572 , KQJ84130 , KQJ84129 , KQJ84128 , KQK19686 , KQK19685
Barley HORVU7Hr1G011890.12 , HORVU7Hr1G011890.13 , HORVU7Hr1G011890.10 , HORVU7Hr1G011890.11 , HORVU7Hr1G011890.16 , HORVU7Hr1G011890.14 , HORVU7Hr1G011890.15 , HORVU7Hr1G011890.8 , HORVU7Hr1G011890.9 , HORVU7Hr1G011890.1 , HORVU7Hr1G011890.2 , HORVU7Hr1G011890.3 , HORVU7Hr1G011890.4 , HORVU7Hr1G011890.5 , HORVU7Hr1G011890.6 , HORVU7Hr1G011890.7
Wheat TraesCS7A02G063700 , TraesCS7A02G063700 , TraesCS7A02G063700 , TraesCS4A02G425300 , TraesCS7D02G058400 , TraesCS7D02G058400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G217600 PHD-finger domain containing protein, putative, expressed -
2 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
3 Sobic.003G021100 expressed protein -
4 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
6 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
7 Sobic.001G303100 expressed protein -
8 Sobic.001G214100 expressed protein -
9 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
11 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
12 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
13 Sobic.010G227800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metal transporter Nramp6, putative, expressed -
14 Sobic.007G164000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
15 Sobic.002G408100 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
16 Sobic.001G194300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
17 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
18 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
19 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
20 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4


Gene co-expression network
sample Sobic010G019000 Sobic010G019000 Sobic010G217600 Sobic010G217600 Sobic010G019000--Sobic010G217600 Sobic004G281800 Sobic004G281800 Sobic010G019000--Sobic004G281800 Sobic003G021100 Sobic003G021100 Sobic010G019000--Sobic003G021100 Sobic001G352400 Sobic001G352400 Sobic010G019000--Sobic001G352400 Sobic002G305000 Sobic002G305000 Sobic010G019000--Sobic002G305000 Sobic010G275700 Sobic010G275700 Sobic010G019000--Sobic010G275700 Sobic001G303100 Sobic001G303100 Sobic010G019000--Sobic001G303100 Sobic001G214100 Sobic001G214100 Sobic010G019000--Sobic001G214100 Sobic009G038900 Sobic009G038900 Sobic010G019000--Sobic009G038900 Sobic010G217600--Sobic010G019000 Sobic004G334300 Sobic004G334300 Sobic010G217600--Sobic004G334300 Sobic010G217600--Sobic001G303100 Sobic001G381600 Sobic001G381600 Sobic010G217600--Sobic001G381600 Sobic001G066500 Sobic001G066500 Sobic010G217600--Sobic001G066500 Sobic010G217600--Sobic002G305000 Sobic009G255700 Sobic009G255700 Sobic010G217600--Sobic009G255700 Sobic010G227800 Sobic010G227800 Sobic010G217600--Sobic010G227800 Sobic004G244900 Sobic004G244900 Sobic010G217600--Sobic004G244900 Sobic004G281800--Sobic009G038900 Sobic005G101200 Sobic005G101200 Sobic004G281800--Sobic005G101200 Sobic004G281800--Sobic001G352400 Sobic004G281800--Sobic010G275700 Sobic004G281800--Sobic003G021100 Sobic002G382700 Sobic002G382700 Sobic004G281800--Sobic002G382700 Sobic005G106600 Sobic005G106600 Sobic004G281800--Sobic005G106600 Sobic004G312600 Sobic004G312600 Sobic004G281800--Sobic004G312600 Sobic003G220100 Sobic003G220100 Sobic004G281800--Sobic003G220100 Sobic003G021100--Sobic010G275700 Sobic003G021100--Sobic005G101200 Sobic003G021100--Sobic004G281800 Sobic004G189800 Sobic004G189800 Sobic003G021100--Sobic004G189800 Sobic003G021100--Sobic009G038900 Sobic010G251700 Sobic010G251700 Sobic003G021100--Sobic010G251700 Sobic010G085100 Sobic010G085100 Sobic003G021100--Sobic010G085100 Sobic004G027600 Sobic004G027600 Sobic003G021100--Sobic004G027600 Sobic008G130000 Sobic008G130000 Sobic003G021100--Sobic008G130000 Sobic001G352400--Sobic004G281800 Sobic001G352400--Sobic010G275700 Sobic001G352400--Sobic002G382700 Sobic004G322700 Sobic004G322700 Sobic001G352400--Sobic004G322700 Sobic002G119100 Sobic002G119100 Sobic001G352400--Sobic002G119100 Sobic008G038500 Sobic008G038500 Sobic001G352400--Sobic008G038500 Sobic001G352400--Sobic005G101200 Sobic004G169000 Sobic004G169000 Sobic001G352400--Sobic004G169000 Sobic001G352400--Sobic009G038900 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic009G201300 Sobic009G201300 Sobic002G305000--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic001G355800 Sobic001G355800 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic003G220800 Sobic003G220800 Sobic002G305000--Sobic003G220800 Sobic010G275700--Sobic003G021100 Sobic010G275700--Sobic005G101200 Sobic010G275700--Sobic004G281800 Sobic010G275700--Sobic001G352400 Sobic010G275700--Sobic004G189800 Sobic010G275700--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic010G275700--Sobic001G333800 Sobic010G275700--Sobic002G119100 Sobic010G275700--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic001G303100--Sobic001G133000 Sobic001G303100--Sobic009G201300 Sobic006G185100 Sobic006G185100 Sobic001G303100--Sobic006G185100 Sobic001G303100--Sobic009G038900 Sobic001G303100--Sobic002G305000 Sobic006G219600 Sobic006G219600 Sobic001G303100--Sobic006G219600 Sobic001G303100--Sobic004G244900 Sobic005G084500 Sobic005G084500 Sobic001G303100--Sobic005G084500 Sobic001G303100--Sobic001G381600 Sobic001G481900 Sobic001G481900 Sobic001G214100--Sobic001G481900 Sobic006G275100 Sobic006G275100 Sobic001G214100--Sobic006G275100 Sobic007G106800 Sobic007G106800 Sobic001G214100--Sobic007G106800 Sobic006G002300 Sobic006G002300 Sobic001G214100--Sobic006G002300 Sobic001G214100--Sobic004G169000 Sobic008G151100 Sobic008G151100 Sobic001G214100--Sobic008G151100 Sobic003G115900 Sobic003G115900 Sobic001G214100--Sobic003G115900 Sobic003G198800 Sobic003G198800 Sobic001G214100--Sobic003G198800 Sobic006G257800 Sobic006G257800 Sobic001G214100--Sobic006G257800 Sobic009G038900--Sobic004G281800 Sobic009G038900--Sobic005G101200 Sobic009G038900--Sobic005G106600 Sobic005G068700 Sobic005G068700 Sobic009G038900--Sobic005G068700 Sobic004G042200 Sobic004G042200 Sobic009G038900--Sobic004G042200 Sobic009G038900--Sobic003G220100 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic009G038900--Sobic010G085100
Octagon: transcription factors


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