Gene annotation
Transcriptome id Sobic.002G408100.1,Sobic.002G408100.2
Synonym Sodium Proton Antiporter 3, NHX2, ATNHX2, Sb02g042190, SbNHX3
Functional annotation - (PubMedID : 29751546)
transporter, monovalent cation:proton antiporter-2 family, putative, expressed
UniProt A0A1B6QG35 , C5X4U8
Pfam PF00999
Panther DB PTHR10110 PTHR10110:SF117
NCBI CDD KOG1965; Sodium/hydrogen exchanger protein
KEGG Orthology K14724; SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G05030 : sodium hydrogen exchanger 2
RAP-DB (Rice) LOC_Os07g47100.2,LOC_Os07g47100.3 : transporter, monovalent cation:proton antiporter-2 family, putative, expressed
MaizeGDB (Corn) Zm00025a049067
Brachypodium KQK14736
Barley HORVU7Hr1G046030.4 , HORVU2Hr1G021020.10 , HORVU7Hr1G046030.2 , HORVU7Hr1G046030.3 , HORVU7Hr1G046030.1 , HORVU2Hr1G021020.9 , HORVU2Hr1G021020.8 , HORVU2Hr1G021020.3 , HORVU2Hr1G021020.2 , HORVU2Hr1G021020.1 , HORVU2Hr1G021020.7 , HORVU2Hr1G021020.6 , HORVU2Hr1G021020.5 , HORVU2Hr1G021020.4 , HORVU2Hr1G021020.11
Wheat TraesCS7B02G191300 , TraesCS2A02G121000 , TraesCS7D02G226200 , TraesCS2B02G141900 , TraesCS2B02G141900 , TraesCS7A02G228400 , TraesCS2D02G123000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G237900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -
2 Sobic.009G140000 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
4 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.010G157300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G426700 expressed protein -
7 Sobic.003G342100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroflavonol-4-reductase, putative, expressed -
8 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
9 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
10 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
11 Sobic.010G217600 PHD-finger domain containing protein, putative, expressed -
12 Sobic.008G047000 actin, putative, expressed K10355: actin, other eukaryote
13 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G303100 expressed protein -
15 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
16 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
17 Sobic.008G051300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
18 Sobic.007G198400 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.002G311200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.004G230700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -


Gene co-expression network
sample Sobic002G408100 Sobic002G408100 Sobic002G237900 Sobic002G237900 Sobic002G408100--Sobic002G237900 Sobic009G140000 Sobic009G140000 Sobic002G408100--Sobic009G140000 Sobic010G019000 Sobic010G019000 Sobic002G408100--Sobic010G019000 Sobic001G531500 Sobic001G531500 Sobic002G408100--Sobic001G531500 Sobic010G157300 Sobic010G157300 Sobic002G408100--Sobic010G157300 Sobic003G426700 Sobic003G426700 Sobic002G408100--Sobic003G426700 Sobic003G342100 Sobic003G342100 Sobic002G408100--Sobic003G342100 Sobic009G123900 Sobic009G123900 Sobic002G408100--Sobic009G123900 Sobic002G403600 Sobic002G403600 Sobic002G408100--Sobic002G403600 Sobic002G237900--Sobic002G408100 Sobic002G237900--Sobic009G140000 Sobic002G237900--Sobic002G403600 Sobic007G141380 Sobic007G141380 Sobic002G237900--Sobic007G141380 Sobic002G237900--Sobic001G531500 Sobic002G237900--Sobic003G426700 Sobic004G027600 Sobic004G027600 Sobic002G237900--Sobic004G027600 Sobic004G317500 Sobic004G317500 Sobic002G237900--Sobic004G317500 Sobic004G189800 Sobic004G189800 Sobic002G237900--Sobic004G189800 Sobic006G260800 Sobic006G260800 Sobic009G140000--Sobic006G260800 Sobic005G001700 Sobic005G001700 Sobic009G140000--Sobic005G001700 Sobic006G055000 Sobic006G055000 Sobic009G140000--Sobic006G055000 Sobic009G062400 Sobic009G062400 Sobic009G140000--Sobic009G062400 Sobic001G517700 Sobic001G517700 Sobic009G140000--Sobic001G517700 Sobic009G140000--Sobic002G403600 Sobic009G140000--Sobic009G123900 Sobic008G052900 Sobic008G052900 Sobic009G140000--Sobic008G052900 Sobic009G219100 Sobic009G219100 Sobic009G140000--Sobic009G219100 Sobic010G217600 Sobic010G217600 Sobic010G019000--Sobic010G217600 Sobic004G281800 Sobic004G281800 Sobic010G019000--Sobic004G281800 Sobic003G021100 Sobic003G021100 Sobic010G019000--Sobic003G021100 Sobic001G352400 Sobic001G352400 Sobic010G019000--Sobic001G352400 Sobic002G305000 Sobic002G305000 Sobic010G019000--Sobic002G305000 Sobic010G275700 Sobic010G275700 Sobic010G019000--Sobic010G275700 Sobic001G303100 Sobic001G303100 Sobic010G019000--Sobic001G303100 Sobic001G214100 Sobic001G214100 Sobic010G019000--Sobic001G214100 Sobic009G038900 Sobic009G038900 Sobic010G019000--Sobic009G038900 Sobic002G118200 Sobic002G118200 Sobic001G531500--Sobic002G118200 Sobic006G064100 Sobic006G064100 Sobic001G531500--Sobic006G064100 Sobic001G531500--Sobic002G403600 Sobic001G073900 Sobic001G073900 Sobic001G531500--Sobic001G073900 Sobic010G205100 Sobic010G205100 Sobic001G531500--Sobic010G205100 Sobic001G531500--Sobic009G123900 Sobic001G531500--Sobic005G001700 Sobic008G001900 Sobic008G001900 Sobic001G531500--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic001G531500--Sobic003G332700 Sobic010G157300--Sobic002G408100 Sobic009G242100 Sobic009G242100 Sobic010G157300--Sobic009G242100 Sobic002G049600 Sobic002G049600 Sobic010G157300--Sobic002G049600 Sobic010G157300--Sobic003G426700 Sobic010G157300--Sobic003G342100 Sobic002G390100 Sobic002G390100 Sobic010G157300--Sobic002G390100 Sobic001G540300 Sobic001G540300 Sobic010G157300--Sobic001G540300 Sobic010G157300--Sobic002G237900 Sobic003G036200 Sobic003G036200 Sobic010G157300--Sobic003G036200 Sobic003G426700--Sobic002G049600 Sobic003G426700--Sobic003G342100 Sobic001G062900 Sobic001G062900 Sobic003G426700--Sobic001G062900 Sobic001G105200 Sobic001G105200 Sobic003G426700--Sobic001G105200 Sobic003G426700--Sobic006G064100 Sobic003G426700--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic003G426700--Sobic008G033200 Sobic003G426700--Sobic010G205100 Sobic002G232200 Sobic002G232200 Sobic003G426700--Sobic002G232200 Sobic003G342100--Sobic001G073900 Sobic003G342100--Sobic001G062900 Sobic003G342100--Sobic003G332700 Sobic003G342100--Sobic009G242100 Sobic005G045000 Sobic005G045000 Sobic003G342100--Sobic005G045000 Sobic003G342100--Sobic003G426700 Sobic003G342100--Sobic001G531500 Sobic003G342100--Sobic006G064100 Sobic003G342100--Sobic002G049600 Sobic009G123900--Sobic002G118200 Sobic005G068700 Sobic005G068700 Sobic009G123900--Sobic005G068700 Sobic002G056500 Sobic002G056500 Sobic009G123900--Sobic002G056500 Sobic009G123900--Sobic003G036200 Sobic009G123900--Sobic001G531500 Sobic004G019800 Sobic004G019800 Sobic009G123900--Sobic004G019800 Sobic002G402700 Sobic002G402700 Sobic009G123900--Sobic002G402700 Sobic007G005400 Sobic007G005400 Sobic009G123900--Sobic007G005400 Sobic004G268300 Sobic004G268300 Sobic009G123900--Sobic004G268300 Sobic002G403600--Sobic001G531500 Sobic002G403600--Sobic004G027600 Sobic002G403600--Sobic006G064100 Sobic002G403600--Sobic001G073900 Sobic004G356400 Sobic004G356400 Sobic002G403600--Sobic004G356400 Sobic002G403600--Sobic003G036200 Sobic006G120500 Sobic006G120500 Sobic002G403600--Sobic006G120500 Sobic002G403600--Sobic005G001700 Sobic010G251700 Sobic010G251700 Sobic002G403600--Sobic010G251700
Octagon: transcription factors


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