Gene annotation
Transcriptome id Sobic.003G426700.1
Synonym Sb03g045870
Functional annotation expressed protein
UniProt C5XHW1
Pfam PF07839
Panther DB PTHR33923 PTHR33923:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005516; calmodulin binding


Orthologs (automatic annotation)
TAIR AT2G38800 : Plant calmodulin-binding protein-related
RAP-DB (Rice) LOC_Os01g72190.1 : expressed protein
MaizeGDB (Corn) Zm00025a043514 , Zm00025a039137 , Zm00025a025992
Brachypodium -
Barley HORVU1Hr1G057240.5 , HORVU1Hr1G057240.1 , HORVU1Hr1G057240.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G342100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroflavonol-4-reductase, putative, expressed -
3 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
4 Sobic.001G105200 - K14810: DDX56, ATP-dependent RNA helicase DDX56/DBP9
5 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
6 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
7 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
8 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
9 Sobic.002G232200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
12 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
13 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
14 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
15 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
16 Sobic.008G047000 actin, putative, expressed K10355: actin, other eukaryote
17 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
18 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
19 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
20 Sobic.006G093100 ferric-chelate reductase, putative, expressed -


Gene co-expression network
sample Sobic003G426700 Sobic003G426700 Sobic002G049600 Sobic002G049600 Sobic003G426700--Sobic002G049600 Sobic003G342100 Sobic003G342100 Sobic003G426700--Sobic003G342100 Sobic001G062900 Sobic001G062900 Sobic003G426700--Sobic001G062900 Sobic001G105200 Sobic001G105200 Sobic003G426700--Sobic001G105200 Sobic006G064100 Sobic006G064100 Sobic003G426700--Sobic006G064100 Sobic001G073900 Sobic001G073900 Sobic003G426700--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic003G426700--Sobic008G033200 Sobic010G205100 Sobic010G205100 Sobic003G426700--Sobic010G205100 Sobic002G232200 Sobic002G232200 Sobic003G426700--Sobic002G232200 Sobic002G049600--Sobic001G073900 Sobic002G049600--Sobic008G033200 Sobic008G117000 Sobic008G117000 Sobic002G049600--Sobic008G117000 Sobic003G036200 Sobic003G036200 Sobic002G049600--Sobic003G036200 Sobic003G332700 Sobic003G332700 Sobic002G049600--Sobic003G332700 Sobic002G049600--Sobic003G426700 Sobic001G261408 Sobic001G261408 Sobic002G049600--Sobic001G261408 Sobic009G242100 Sobic009G242100 Sobic002G049600--Sobic009G242100 Sobic002G049600--Sobic003G342100 Sobic003G342100--Sobic001G073900 Sobic003G342100--Sobic001G062900 Sobic003G342100--Sobic003G332700 Sobic003G342100--Sobic009G242100 Sobic005G045000 Sobic005G045000 Sobic003G342100--Sobic005G045000 Sobic003G342100--Sobic003G426700 Sobic001G531500 Sobic001G531500 Sobic003G342100--Sobic001G531500 Sobic003G342100--Sobic006G064100 Sobic003G342100--Sobic002G049600 Sobic007G090403 Sobic007G090403 Sobic001G062900--Sobic007G090403 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G062900--Sobic001G073900 Sobic001G530900 Sobic001G530900 Sobic001G062900--Sobic001G530900 Sobic001G062900--Sobic001G531500 Sobic001G062900--Sobic003G332700 Sobic001G062900--Sobic001G105200 Sobic005G001700 Sobic005G001700 Sobic001G062900--Sobic005G001700 Sobic001G105200--Sobic001G062900 Sobic001G105200--Sobic003G332700 Sobic001G105200--Sobic003G426700 Sobic001G105200--Sobic002G049600 Sobic001G105200--Sobic010G205100 Sobic009G123900 Sobic009G123900 Sobic001G105200--Sobic009G123900 Sobic003G180200 Sobic003G180200 Sobic001G105200--Sobic003G180200 Sobic002G118200 Sobic002G118200 Sobic001G105200--Sobic002G118200 Sobic001G105200--Sobic001G531500 Sobic006G064100--Sobic010G205100 Sobic006G064100--Sobic001G531500 Sobic002G403600 Sobic002G403600 Sobic006G064100--Sobic002G403600 Sobic006G064100--Sobic001G073900 Sobic006G120500 Sobic006G120500 Sobic006G064100--Sobic006G120500 Sobic004G317500 Sobic004G317500 Sobic006G064100--Sobic004G317500 Sobic001G305600 Sobic001G305600 Sobic006G064100--Sobic001G305600 Sobic006G064100--Sobic003G036200 Sobic010G085100 Sobic010G085100 Sobic006G064100--Sobic010G085100 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic001G073900--Sobic008G117000 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G073900--Sobic001G531500 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic001G073900--Sobic002G049600 Sobic008G033200--Sobic003G036200 Sobic002G324500 Sobic002G324500 Sobic008G033200--Sobic002G324500 Sobic004G215800 Sobic004G215800 Sobic008G033200--Sobic004G215800 Sobic006G093100 Sobic006G093100 Sobic008G033200--Sobic006G093100 Sobic008G033200--Sobic006G120500 Sobic002G390100 Sobic002G390100 Sobic008G033200--Sobic002G390100 Sobic008G033200--Sobic008G117000 Sobic007G105500 Sobic007G105500 Sobic008G033200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic008G033200--Sobic003G185900 Sobic010G205100--Sobic006G064100 Sobic010G205100--Sobic010G085100 Sobic010G205100--Sobic001G531500 Sobic010G205100--Sobic001G073900 Sobic009G038900 Sobic009G038900 Sobic010G205100--Sobic009G038900 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic010G205100--Sobic003G332700 Sobic002G232200--Sobic008G033200 Sobic006G055000 Sobic006G055000 Sobic002G232200--Sobic006G055000 Sobic002G232200--Sobic006G093100 Sobic002G232200--Sobic002G324500 Sobic002G232200--Sobic003G036200 Sobic002G232200--Sobic005G001700 Sobic002G232200--Sobic001G073900 Sobic002G232200--Sobic003G426700 Sobic002G232200--Sobic008G117000
Octagon: transcription factors


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