Gene annotation
Transcriptome id Sobic.001G303100.2,Sobic.001G303100.3,Sobic.001G303100.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S8A6 , A0A1B6QLZ7
Pfam -
Panther DB PTHR33167 PTHR33167:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62530 : Plant protein of unknown function (DUF863)
RAP-DB (Rice) LOC_Os10g40580.1 : expressed protein
MaizeGDB (Corn) Zm00025a003303 , Zm00025a051994
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G133000 expressed protein -
2 Sobic.009G201300 - -
3 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
4 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
6 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
7 Sobic.004G244900 expressed protein -
8 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
9 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
10 Sobic.001G251800 OsFBK23 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
12 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
13 Sobic.004G038800 OsFBX188 - F-box domain containing protein, expressed -
14 Sobic.010G217600 PHD-finger domain containing protein, putative, expressed -
15 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
16 Sobic.003G264800 expressed protein -
17 Sobic.001G049500 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
18 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
19 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
20 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G303100 Sobic001G303100 Sobic001G133000 Sobic001G133000 Sobic001G303100--Sobic001G133000 Sobic009G201300 Sobic009G201300 Sobic001G303100--Sobic009G201300 Sobic006G185100 Sobic006G185100 Sobic001G303100--Sobic006G185100 Sobic009G038900 Sobic009G038900 Sobic001G303100--Sobic009G038900 Sobic002G305000 Sobic002G305000 Sobic001G303100--Sobic002G305000 Sobic006G219600 Sobic006G219600 Sobic001G303100--Sobic006G219600 Sobic004G244900 Sobic004G244900 Sobic001G303100--Sobic004G244900 Sobic005G084500 Sobic005G084500 Sobic001G303100--Sobic005G084500 Sobic001G381600 Sobic001G381600 Sobic001G303100--Sobic001G381600 Sobic005G106600 Sobic005G106600 Sobic001G133000--Sobic005G106600 Sobic001G133000--Sobic006G219600 Sobic001G133000--Sobic009G038900 Sobic003G220100 Sobic003G220100 Sobic001G133000--Sobic003G220100 Sobic006G133900 Sobic006G133900 Sobic001G133000--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic001G133000--Sobic001G333800 Sobic001G243200 Sobic001G243200 Sobic001G133000--Sobic001G243200 Sobic001G133000--Sobic009G201300 Sobic009G215500 Sobic009G215500 Sobic001G133000--Sobic009G215500 Sobic009G201300--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic003G119600 Sobic003G119600 Sobic009G201300--Sobic003G119600 Sobic009G201300--Sobic004G244900 Sobic009G201300--Sobic001G133000 Sobic008G001200 Sobic008G001200 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic002G325300 Sobic002G325300 Sobic006G185100--Sobic002G325300 Sobic003G253600 Sobic003G253600 Sobic006G185100--Sobic003G253600 Sobic002G257750 Sobic002G257750 Sobic006G185100--Sobic002G257750 Sobic004G140600 Sobic004G140600 Sobic006G185100--Sobic004G140600 Sobic001G392300 Sobic001G392300 Sobic006G185100--Sobic001G392300 Sobic005G059800 Sobic005G059800 Sobic006G185100--Sobic005G059800 Sobic006G185100--Sobic003G119600 Sobic001G080700 Sobic001G080700 Sobic006G185100--Sobic001G080700 Sobic008G070800 Sobic008G070800 Sobic006G185100--Sobic008G070800 Sobic004G281800 Sobic004G281800 Sobic009G038900--Sobic004G281800 Sobic005G101200 Sobic005G101200 Sobic009G038900--Sobic005G101200 Sobic009G038900--Sobic005G106600 Sobic005G068700 Sobic005G068700 Sobic009G038900--Sobic005G068700 Sobic004G042200 Sobic004G042200 Sobic009G038900--Sobic004G042200 Sobic009G038900--Sobic003G220100 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic010G085100 Sobic010G085100 Sobic009G038900--Sobic010G085100 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic002G305000--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic001G355800 Sobic001G355800 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic003G220800 Sobic003G220800 Sobic002G305000--Sobic003G220800 Sobic006G219600--Sobic003G155100 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G219600--Sobic006G133900 Sobic006G219600--Sobic001G133000 Sobic006G219600--Sobic005G106600 Sobic006G219600--Sobic005G084500 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic004G244900--Sobic003G119600 Sobic004G244900--Sobic003G155100 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic007G005400 Sobic007G005400 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic004G238200 Sobic004G238200 Sobic005G084500--Sobic004G238200 Sobic004G337400 Sobic004G337400 Sobic005G084500--Sobic004G337400 Sobic005G084500--Sobic006G219600 Sobic004G019800 Sobic004G019800 Sobic005G084500--Sobic004G019800 Sobic004G163800 Sobic004G163800 Sobic005G084500--Sobic004G163800 Sobic001G530900 Sobic001G530900 Sobic005G084500--Sobic001G530900 Sobic001G516901 Sobic001G516901 Sobic005G084500--Sobic001G516901 Sobic008G151100 Sobic008G151100 Sobic001G381600--Sobic008G151100 Sobic001G381600--Sobic009G201300 Sobic007G198300 Sobic007G198300 Sobic001G381600--Sobic007G198300 Sobic006G002300 Sobic006G002300 Sobic001G381600--Sobic006G002300 Sobic003G115900 Sobic003G115900 Sobic001G381600--Sobic003G115900 Sobic001G212300 Sobic001G212300 Sobic001G381600--Sobic001G212300 Sobic001G381600--Sobic009G038900 Sobic003G198800 Sobic003G198800 Sobic001G381600--Sobic003G198800 Sobic001G381600--Sobic003G155100
Octagon: transcription factors


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