Gene annotation
Transcriptome id Sobic.002G383800.1
Synonym Sb02g040010
Functional annotation GTP-binding protein, putative, expressed
UniProt C5X2L8
Pfam PF01926 PF02824 PF16897
Panther DB PTHR11702 PTHR11702:SF26
NCBI CDD -
KEGG Orthology K06944; uncharacterized protein
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT4G39520 : GTP-binding protein-related
RAP-DB (Rice) LOC_Os07g43470.1 : GTP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a048830
Brachypodium KQK15100
Barley HORVU2Hr1G028600.4 , HORVU2Hr1G028600.5 , HORVU2Hr1G028600.6 , HORVU2Hr1G028600.1 , HORVU2Hr1G028600.3 , HORVU2Hr1G028600.9 , HORVU2Hr1G028600.7 , HORVU2Hr1G028600.2 , HORVU2Hr1G028600.10 , HORVU2Hr1G028600.8
Wheat TraesCS2B02G184100 , TraesCS2A02G158300 , TraesCS2D02G165200
Populus -


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cDNA sequences
Sobic.002G383800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G070800 expressed protein -
2 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
3 Sobic.001G355800 methyltransferase, putative, expressed -
4 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
5 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
7 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
10 Sobic.001G303100 expressed protein -
11 Sobic.009G201300 - -
12 Sobic.002G091600 methyltransferase, putative, expressed -
13 Sobic.003G264800 expressed protein -
14 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
15 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
16 Sobic.010G183300 - -
17 Sobic.003G293300 nucleoporin, putative, expressed K14304: nuclear pore complex protein Nup85
18 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
19 Sobic.003G176000 lipase family protein, putative, expressed -
20 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50


Gene co-expression network
sample Sobic002G383800 Sobic002G383800 Sobic008G070800 Sobic008G070800 Sobic002G383800--Sobic008G070800 Sobic003G221400 Sobic003G221400 Sobic002G383800--Sobic003G221400 Sobic001G355800 Sobic001G355800 Sobic002G383800--Sobic001G355800 Sobic001G333100 Sobic001G333100 Sobic002G383800--Sobic001G333100 Sobic002G131200 Sobic002G131200 Sobic002G383800--Sobic002G131200 Sobic008G054000 Sobic008G054000 Sobic002G383800--Sobic008G054000 Sobic003G311900 Sobic003G311900 Sobic002G383800--Sobic003G311900 Sobic002G311100 Sobic002G311100 Sobic002G383800--Sobic002G311100 Sobic004G131800 Sobic004G131800 Sobic002G383800--Sobic004G131800 Sobic001G080700 Sobic001G080700 Sobic008G070800--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic008G070800--Sobic001G392300 Sobic006G185100 Sobic006G185100 Sobic008G070800--Sobic006G185100 Sobic005G059800 Sobic005G059800 Sobic008G070800--Sobic005G059800 Sobic001G151100 Sobic001G151100 Sobic008G070800--Sobic001G151100 Sobic002G047700 Sobic002G047700 Sobic008G070800--Sobic002G047700 Sobic002G294800 Sobic002G294800 Sobic008G070800--Sobic002G294800 Sobic008G070800--Sobic001G333100 Sobic008G070800--Sobic002G383800 Sobic007G054800 Sobic007G054800 Sobic003G221400--Sobic007G054800 Sobic005G162500 Sobic005G162500 Sobic003G221400--Sobic005G162500 Sobic001G493700 Sobic001G493700 Sobic003G221400--Sobic001G493700 Sobic001G110600 Sobic001G110600 Sobic003G221400--Sobic001G110600 Sobic001G004400 Sobic001G004400 Sobic003G221400--Sobic001G004400 Sobic003G221400--Sobic001G333100 Sobic002G179400 Sobic002G179400 Sobic003G221400--Sobic002G179400 Sobic001G192000 Sobic001G192000 Sobic003G221400--Sobic001G192000 Sobic008G085300 Sobic008G085300 Sobic003G221400--Sobic008G085300 Sobic001G355800--Sobic002G131200 Sobic001G355800--Sobic001G192000 Sobic001G355800--Sobic001G333100 Sobic009G201300 Sobic009G201300 Sobic001G355800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G355800--Sobic003G354600 Sobic002G305000 Sobic002G305000 Sobic001G355800--Sobic002G305000 Sobic001G355800--Sobic003G311900 Sobic003G119600 Sobic003G119600 Sobic001G355800--Sobic003G119600 Sobic002G091600 Sobic002G091600 Sobic001G355800--Sobic002G091600 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic002G131200--Sobic001G355800 Sobic010G059000 Sobic010G059000 Sobic002G131200--Sobic010G059000 Sobic002G131200--Sobic002G091600 Sobic002G131200--Sobic008G070800 Sobic002G309900 Sobic002G309900 Sobic002G131200--Sobic002G309900 Sobic002G131200--Sobic002G383800 Sobic003G011300 Sobic003G011300 Sobic002G131200--Sobic003G011300 Sobic010G205100 Sobic010G205100 Sobic002G131200--Sobic010G205100 Sobic002G359400 Sobic002G359400 Sobic002G131200--Sobic002G359400 Sobic004G244900 Sobic004G244900 Sobic008G054000--Sobic004G244900 Sobic004G356700 Sobic004G356700 Sobic008G054000--Sobic004G356700 Sobic004G334300 Sobic004G334300 Sobic008G054000--Sobic004G334300 Sobic002G257750 Sobic002G257750 Sobic008G054000--Sobic002G257750 Sobic008G044100 Sobic008G044100 Sobic008G054000--Sobic008G044100 Sobic003G398700 Sobic003G398700 Sobic008G054000--Sobic003G398700 Sobic003G101700 Sobic003G101700 Sobic008G054000--Sobic003G101700 Sobic002G316600 Sobic002G316600 Sobic008G054000--Sobic002G316600 Sobic002G344000 Sobic002G344000 Sobic008G054000--Sobic002G344000 Sobic003G311900--Sobic004G244900 Sobic003G311900--Sobic003G264100 Sobic002G167500 Sobic002G167500 Sobic003G311900--Sobic002G167500 Sobic003G311900--Sobic001G192000 Sobic002G275700 Sobic002G275700 Sobic003G311900--Sobic002G275700 Sobic004G001500 Sobic004G001500 Sobic003G311900--Sobic004G001500 Sobic005G026000 Sobic005G026000 Sobic003G311900--Sobic005G026000 Sobic003G311900--Sobic001G355800 Sobic001G136800 Sobic001G136800 Sobic003G311900--Sobic001G136800 Sobic010G147100 Sobic010G147100 Sobic002G311100--Sobic010G147100 Sobic009G074400 Sobic009G074400 Sobic002G311100--Sobic009G074400 Sobic010G013200 Sobic010G013200 Sobic002G311100--Sobic010G013200 Sobic002G311100--Sobic003G264100 Sobic010G131900 Sobic010G131900 Sobic002G311100--Sobic010G131900 Sobic010G074300 Sobic010G074300 Sobic002G311100--Sobic010G074300 Sobic009G143700 Sobic009G143700 Sobic002G311100--Sobic009G143700 Sobic002G311100--Sobic009G201300 Sobic003G195000 Sobic003G195000 Sobic002G311100--Sobic003G195000 Sobic003G176000 Sobic003G176000 Sobic004G131800--Sobic003G176000 Sobic002G211800 Sobic002G211800 Sobic004G131800--Sobic002G211800 Sobic002G170200 Sobic002G170200 Sobic004G131800--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic004G131800--Sobic006G127600 Sobic010G032900 Sobic010G032900 Sobic004G131800--Sobic010G032900 Sobic004G131800--Sobic002G344000 Sobic006G056700 Sobic006G056700 Sobic004G131800--Sobic006G056700 Sobic001G178300 Sobic001G178300 Sobic004G131800--Sobic001G178300 Sobic004G131800--Sobic002G294800
Octagon: transcription factors


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