Gene annotation
Transcriptome id Sobic.001G136800.1
Synonym Sb01g011930, DSPTP1
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt C5WPM6
Pfam PF00782
Panther DB PTHR10159
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT3G23610 : dual specificity protein phosphatase 1
RAP-DB (Rice) LOC_Os01g29469.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a007448 , Zm00025a007456
Brachypodium KQK04416 , KQK04417
Barley HORVU3Hr1G030420.10 , HORVU3Hr1G030420.8 , HORVU3Hr1G030420.9 , HORVU3Hr1G030420.4 , HORVU3Hr1G030420.5 , HORVU3Hr1G030420.6 , HORVU3Hr1G030420.1 , HORVU3Hr1G030420.2 , HORVU3Hr1G030420.3
Wheat TraesCS3A02G149800 , TraesCS3B02G176900 , TraesCS3D02G157700 , TraesCS3D02G157700 , TraesCS3D02G157700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G136800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G354600 csAtPR5, putative, expressed -
2 Sobic.005G199400 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
3 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
4 Sobic.003G264800 expressed protein -
5 Sobic.004G244900 expressed protein -
6 Sobic.009G201300 - -
7 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
9 Sobic.002G091600 methyltransferase, putative, expressed -
10 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
11 Sobic.004G069000 expressed protein -
12 Sobic.001G355800 methyltransferase, putative, expressed -
13 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
14 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
15 Sobic.007G136200 expressed protein -
16 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
18 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
19 Sobic.009G103000 ubiquitin family protein, putative, expressed -
20 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic001G136800 Sobic001G136800 Sobic003G354600 Sobic003G354600 Sobic001G136800--Sobic003G354600 Sobic005G199400 Sobic005G199400 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic009G201300 Sobic009G201300 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic005G199400--Sobic001G136800 Sobic002G072400 Sobic002G072400 Sobic005G199400--Sobic002G072400 Sobic002G131500 Sobic002G131500 Sobic005G199400--Sobic002G131500 Sobic004G238200 Sobic004G238200 Sobic005G199400--Sobic004G238200 Sobic005G199400--Sobic003G264800 Sobic005G084800 Sobic005G084800 Sobic005G199400--Sobic005G084800 Sobic001G333500 Sobic001G333500 Sobic005G199400--Sobic001G333500 Sobic003G186900 Sobic003G186900 Sobic005G199400--Sobic003G186900 Sobic002G349100 Sobic002G349100 Sobic005G199400--Sobic002G349100 Sobic010G125500--Sobic001G136800 Sobic004G356700 Sobic004G356700 Sobic010G125500--Sobic004G356700 Sobic010G125500--Sobic004G244900 Sobic006G219600 Sobic006G219600 Sobic010G125500--Sobic006G219600 Sobic006G259800 Sobic006G259800 Sobic010G125500--Sobic006G259800 Sobic003G155100 Sobic003G155100 Sobic010G125500--Sobic003G155100 Sobic001G530900 Sobic001G530900 Sobic010G125500--Sobic001G530900 Sobic001G457800 Sobic001G457800 Sobic010G125500--Sobic001G457800 Sobic009G135000 Sobic009G135000 Sobic010G125500--Sobic009G135000 Sobic003G264800--Sobic003G186900 Sobic003G003450 Sobic003G003450 Sobic003G264800--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic003G264800--Sobic006G232600 Sobic003G264800--Sobic005G106600 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic003G264800--Sobic004G238200 Sobic004G207400 Sobic004G207400 Sobic003G264800--Sobic004G207400 Sobic004G337400 Sobic004G337400 Sobic003G264800--Sobic004G337400 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic004G244900--Sobic003G119600 Sobic004G244900--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic004G244900--Sobic008G001200 Sobic004G244900--Sobic004G356700 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic009G201300--Sobic006G219600 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic009G201300--Sobic003G119600 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic009G201300--Sobic008G001200 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic005G106600--Sobic006G219600 Sobic001G378100 Sobic001G378100 Sobic005G106600--Sobic001G378100 Sobic003G311900--Sobic004G244900 Sobic003G264100 Sobic003G264100 Sobic003G311900--Sobic003G264100 Sobic002G167500 Sobic002G167500 Sobic003G311900--Sobic002G167500 Sobic001G192000 Sobic001G192000 Sobic003G311900--Sobic001G192000 Sobic003G311900--Sobic002G275700 Sobic004G001500 Sobic004G001500 Sobic003G311900--Sobic004G001500 Sobic005G026000 Sobic005G026000 Sobic003G311900--Sobic005G026000 Sobic003G311900--Sobic001G355800 Sobic003G311900--Sobic001G136800 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic002G091600--Sobic005G106600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.