Gene annotation
Transcriptome id Sobic.001G355800.1
Synonym Sb01g034010
Functional annotation methyltransferase, putative, expressed
UniProt C5WYL4
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF794
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G26850 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g26200.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a052073 , Zm00025a002669
Brachypodium KQK21497 , KQK21496 , KQK21495 , PNT77319 , PNT77321 , PNT77320 , PNT77323 , PNT77322
Barley HORVU5Hr1G102720.9 , HORVU5Hr1G102720.8 , HORVU5Hr1G102720.3 , HORVU5Hr1G102720.2 , HORVU5Hr1G102720.1 , HORVU5Hr1G102720.7 , HORVU5Hr1G102720.6 , HORVU5Hr1G102720.5 , HORVU5Hr1G102720.4 , HORVU5Hr1G102720.19 , HORVU5Hr1G102720.18 , HORVU5Hr1G102720.13 , HORVU5Hr1G102720.12 , HORVU5Hr1G102720.11 , HORVU5Hr1G102720.10 , HORVU5Hr1G102720.17 , HORVU5Hr1G102720.16 , HORVU5Hr1G102720.15 , HORVU5Hr1G102720.14
Wheat TraesCS5D02G429900 , TraesCS5B02G423200 , TraesCS5B02G423200 , TraesCS5A02G421600 , TraesCS5A02G421600
Populus PNT24710 , PNT24709 , PNT24708


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cDNA sequences
Sobic.001G355800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
3 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
4 Sobic.009G201300 - -
5 Sobic.003G354600 csAtPR5, putative, expressed -
6 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
7 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.002G091600 methyltransferase, putative, expressed -
10 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
11 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
12 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
13 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
14 Sobic.008G070800 expressed protein -
15 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
16 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
17 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
18 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
19 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic001G355800 Sobic001G355800 Sobic002G131200 Sobic002G131200 Sobic001G355800--Sobic002G131200 Sobic001G192000 Sobic001G192000 Sobic001G355800--Sobic001G192000 Sobic001G333100 Sobic001G333100 Sobic001G355800--Sobic001G333100 Sobic009G201300 Sobic009G201300 Sobic001G355800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G355800--Sobic003G354600 Sobic002G305000 Sobic002G305000 Sobic001G355800--Sobic002G305000 Sobic003G311900 Sobic003G311900 Sobic001G355800--Sobic003G311900 Sobic003G119600 Sobic003G119600 Sobic001G355800--Sobic003G119600 Sobic002G091600 Sobic002G091600 Sobic001G355800--Sobic002G091600 Sobic002G131200--Sobic001G355800 Sobic010G059000 Sobic010G059000 Sobic002G131200--Sobic010G059000 Sobic002G131200--Sobic002G091600 Sobic008G070800 Sobic008G070800 Sobic002G131200--Sobic008G070800 Sobic002G309900 Sobic002G309900 Sobic002G131200--Sobic002G309900 Sobic002G383800 Sobic002G383800 Sobic002G131200--Sobic002G383800 Sobic003G011300 Sobic003G011300 Sobic002G131200--Sobic003G011300 Sobic010G205100 Sobic010G205100 Sobic002G131200--Sobic010G205100 Sobic002G359400 Sobic002G359400 Sobic002G131200--Sobic002G359400 Sobic002G275700 Sobic002G275700 Sobic001G192000--Sobic002G275700 Sobic009G255700 Sobic009G255700 Sobic001G192000--Sobic009G255700 Sobic005G162500 Sobic005G162500 Sobic001G192000--Sobic005G162500 Sobic008G088872 Sobic008G088872 Sobic001G192000--Sobic008G088872 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G370900 Sobic001G370900 Sobic001G192000--Sobic001G370900 Sobic003G221400 Sobic003G221400 Sobic001G192000--Sobic003G221400 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic006G219600 Sobic006G219600 Sobic009G201300--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic009G201300--Sobic003G119600 Sobic004G244900 Sobic004G244900 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic008G001200 Sobic008G001200 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G354600--Sobic003G119600 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic002G305000--Sobic002G359400 Sobic002G305000--Sobic009G201300 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic001G303100 Sobic001G303100 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic002G305000--Sobic003G220800 Sobic003G311900--Sobic004G244900 Sobic003G311900--Sobic003G264100 Sobic002G167500 Sobic002G167500 Sobic003G311900--Sobic002G167500 Sobic003G311900--Sobic001G192000 Sobic003G311900--Sobic002G275700 Sobic004G001500 Sobic004G001500 Sobic003G311900--Sobic004G001500 Sobic005G026000 Sobic005G026000 Sobic003G311900--Sobic005G026000 Sobic003G311900--Sobic001G355800 Sobic003G311900--Sobic001G136800 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G119600--Sobic003G354600 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic007G136200 Sobic007G136200 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic001G530900 Sobic001G530900 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic002G091600--Sobic005G106600
Octagon: transcription factors


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