Gene annotation
| Transcriptome id | Sobic.002G359400.1 |
|---|---|
| Synonym | Sb02g038010 |
| Functional annotation | transporter-related, putative, expressed |
| UniProt | A0A1B6QFA0 |
| Pfam | PF03151 |
| Panther DB | PTHR11132 PTHR11132:SF132 |
| NCBI CDD | KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter |
| KEGG Orthology | K15285; solute carrier family 35, member E3 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G09810 : Nucleotide-sugar transporter family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os05g12490.1 : transporter-related, putative, expressed |
| MaizeGDB (Corn) | Zm00025a015067 |
| Brachypodium | KQK00334 , KQJ92447 , KQJ83443 , KQJ83442 , KQK00333 |
| Barley | HORVU6Hr1G057090.9 , HORVU6Hr1G057090.8 , HORVU6Hr1G057090.3 , HORVU6Hr1G057090.2 , HORVU6Hr1G057090.1 , HORVU6Hr1G057090.6 , HORVU6Hr1G057090.5 , HORVU6Hr1G057090.4 , HORVU6Hr1G057090.12 , HORVU6Hr1G057090.11 , HORVU6Hr1G057090.10 |
| Wheat | TraesCS6B02G252200 , TraesCS6A02G229300 , TraesCS6D02G205500 , TraesCS2D02G358100 , TraesCS5B02G138900 , TraesCS5A02G140600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G007000 | -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed | K19269: PGP, phosphoglycolate phosphatase |
| 2 | Sobic.001G392300 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed | K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 |
| 3 | Sobic.010G262000 | tRNA-dihydrouridine synthase, putative, expressed | K05542: tRNA-dihydrouridine synthase 1 |
| 4 | Sobic.006G041600 | WD domain, G-beta repeat domain containing protein, expressed | K17985: activating molecule in BECN1-regulated autophagy protein 1 |
| 5 | Sobic.008G004600 | ubiquitin-activating enzyme, putative, expressed | K03178: UBE1, ubiquitin-activating enzyme E1 |
| 6 | Sobic.002G305000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed | - |
| 7 | Sobic.002G325300 | acyltransferase, putative, expressed | K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4 |
| 8 | Sobic.006G103200 | endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed | - |
| 9 | Sobic.003G102400 | expressed protein | - |
| 10 | Sobic.009G068500 | expressed protein | - |
| 11 | Sobic.009G132700 | - | - |
| 12 | Sobic.004G140600 | exonuclease, putative, expressed | K13288: orn, REX2, oligoribonuclease |
| 13 | Sobic.003G355900 | prenylated rab acceptor, putative, expressed | - |
| 14 | Sobic.006G136400 | eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed | K03260: translation initiation factor 4G |
| 15 | Sobic.009G056200 | arginyl-tRNA synthetase, putative, expressed | K01887: RARS, arginyl-tRNA synthetase |
| 16 | Sobic.005G027400 | RNA recognition motif containing protein, expressed | K13161: heterogeneous nuclear ribonucleoprotein R |
| 17 | Sobic.008G070800 | expressed protein | - |
| 18 | Sobic.002G294800 | cyclic nucleotide-gated ion channel, putative, expressed | K05391: cyclic nucleotide gated channel, plant |
| 19 | Sobic.008G089100 | armadillo/beta-catenin repeat family protein, putative, expressed | - |
| 20 | Sobic.007G207200 | phenylalanyl-tRNA synthetase beta chain, putative, expressed | K01890: FARSB, phenylalanyl-tRNA synthetase beta chain |
Gene co-expression network
Octagon: transcription factors
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