Gene annotation
Transcriptome id Sobic.002G305000.3,Sobic.002G305000.4,Sobic.002G305000.5,Sobic.002G305000.2
Synonym Sb02g033540
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
small G protein family protein, putative, expressed
UniProt C5X958 , A0A1W0W6G0 , A0A1W0W6G7 , A0A1W0W6I8
Pfam PF00620
Panther DB PTHR23176 PTHR23176:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G61530 : small G protein family protein / RhoGAP family protein
RAP-DB (Rice) LOC_Os07g30300.1 : small G protein family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048078 , Zm00025a014679
Brachypodium PNT75065 , KQK16189
Barley HORVU2Hr1G050640.3 , HORVU2Hr1G050640.11 , HORVU2Hr1G050640.10 , HORVU2Hr1G050640.2 , HORVU2Hr1G050640.1 , HORVU2Hr1G050640.7 , HORVU2Hr1G050640.6 , HORVU2Hr1G050640.5 , HORVU2Hr1G050640.4 , HORVU2Hr1G050640.9 , HORVU2Hr1G050640.8
Wheat TraesCS2D02G235600 , TraesCS2D02G235600 , TraesCS2D02G235600 , TraesCS2B02G257100 , TraesCS2B02G257100 , TraesCS2A02G231000 , TraesCS2A02G231000 , TraesCS2A02G231000
Populus -


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cDNA sequences
Sobic.002G305000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
2 Sobic.009G201300 - -
3 Sobic.003G354600 csAtPR5, putative, expressed -
4 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
5 Sobic.001G355800 methyltransferase, putative, expressed -
6 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
7 Sobic.001G303100 expressed protein -
8 Sobic.010G074300 smr domain containing protein, expressed -
9 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
10 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
13 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
14 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
15 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
16 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
17 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
18 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
19 Sobic.003G247500 expressed protein -
20 Sobic.009G068500 expressed protein -


Gene co-expression network
sample Sobic002G305000 Sobic002G305000 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic009G201300 Sobic009G201300 Sobic002G305000--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic001G355800 Sobic001G355800 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic001G303100 Sobic001G303100 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic003G220800 Sobic003G220800 Sobic002G305000--Sobic003G220800 Sobic001G007000 Sobic001G007000 Sobic002G359400--Sobic001G007000 Sobic001G392300 Sobic001G392300 Sobic002G359400--Sobic001G392300 Sobic010G262000 Sobic010G262000 Sobic002G359400--Sobic010G262000 Sobic006G041600 Sobic006G041600 Sobic002G359400--Sobic006G041600 Sobic008G004600 Sobic008G004600 Sobic002G359400--Sobic008G004600 Sobic002G359400--Sobic002G305000 Sobic002G325300 Sobic002G325300 Sobic002G359400--Sobic002G325300 Sobic006G103200 Sobic006G103200 Sobic002G359400--Sobic006G103200 Sobic003G102400 Sobic003G102400 Sobic002G359400--Sobic003G102400 Sobic006G219600 Sobic006G219600 Sobic009G201300--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic003G119600 Sobic003G119600 Sobic009G201300--Sobic003G119600 Sobic004G244900 Sobic004G244900 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic008G001200 Sobic008G001200 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G354600--Sobic003G119600 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G354600--Sobic003G220800 Sobic003G316500 Sobic003G316500 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic010G147100--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic001G268200 Sobic001G268200 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic002G131200 Sobic002G131200 Sobic001G355800--Sobic002G131200 Sobic001G192000 Sobic001G192000 Sobic001G355800--Sobic001G192000 Sobic001G333100 Sobic001G333100 Sobic001G355800--Sobic001G333100 Sobic001G355800--Sobic009G201300 Sobic001G355800--Sobic003G354600 Sobic001G355800--Sobic002G305000 Sobic003G311900 Sobic003G311900 Sobic001G355800--Sobic003G311900 Sobic001G355800--Sobic003G119600 Sobic002G091600 Sobic002G091600 Sobic001G355800--Sobic002G091600 Sobic010G262500 Sobic010G262500 Sobic006G175800--Sobic010G262500 Sobic004G169000 Sobic004G169000 Sobic006G175800--Sobic004G169000 Sobic006G175800--Sobic002G305000 Sobic002G187700 Sobic002G187700 Sobic006G175800--Sobic002G187700 Sobic001G488700 Sobic001G488700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic003G043300 Sobic003G043300 Sobic006G175800--Sobic003G043300 Sobic001G500800 Sobic001G500800 Sobic006G175800--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic006G175800--Sobic010G196500 Sobic001G303100--Sobic001G133000 Sobic001G303100--Sobic009G201300 Sobic006G185100 Sobic006G185100 Sobic001G303100--Sobic006G185100 Sobic009G038900 Sobic009G038900 Sobic001G303100--Sobic009G038900 Sobic001G303100--Sobic002G305000 Sobic001G303100--Sobic006G219600 Sobic001G303100--Sobic004G244900 Sobic005G084500 Sobic005G084500 Sobic001G303100--Sobic005G084500 Sobic001G381600 Sobic001G381600 Sobic001G303100--Sobic001G381600 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic010G074300--Sobic003G316500 Sobic010G074300--Sobic001G268200 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000
Octagon: transcription factors


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