Gene annotation
Transcriptome id Sobic.002G131500.1
Synonym ATNAP11, NAP11, TGD3, Sb02g011310
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5X5U1
Pfam PF13304
Panther DB PTHR24220 PTHR24220:SF441
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT1G65410 : non-intrinsic ABC protein 11
RAP-DB (Rice) LOC_Os03g46740.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a045912
Brachypodium -
Barley HORVU5Hr1G091750.10 , HORVU5Hr1G091750.1 , HORVU5Hr1G091750.3 , HORVU5Hr1G091750.2 , HORVU5Hr1G091750.5 , HORVU5Hr1G091750.4 , HORVU5Hr1G091750.7 , HORVU5Hr1G091750.6 , HORVU5Hr1G091750.9 , HORVU5Hr1G091750.8
Wheat TraesCS5B02G369900 , TraesCS5D02G377300 , TraesCS5A02G367900
Populus PNS22374 , PNS22373 , PNT50892


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cDNA sequences
Sobic.002G131500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G199400 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
2 Sobic.002G167500 expressed protein -
3 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
4 Sobic.001G355800 methyltransferase, putative, expressed -
5 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
6 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
7 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
8 Sobic.004G026500 expressed protein -
9 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
10 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
11 Sobic.010G140600 bolA, putative, expressed -
12 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
13 Sobic.009G193500 AGAP007115-PA, putative, expressed -
14 Sobic.001G396000 OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed -
15 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
16 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
17 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
18 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
19 Sobic.005G084800 expressed protein -
20 Sobic.007G227700 expressed protein -


Gene co-expression network
sample Sobic002G131500 Sobic002G131500 Sobic005G199400 Sobic005G199400 Sobic002G131500--Sobic005G199400 Sobic002G167500 Sobic002G167500 Sobic002G131500--Sobic002G167500 Sobic003G311900 Sobic003G311900 Sobic002G131500--Sobic003G311900 Sobic001G355800 Sobic001G355800 Sobic002G131500--Sobic001G355800 Sobic006G274800 Sobic006G274800 Sobic002G131500--Sobic006G274800 Sobic004G121300 Sobic004G121300 Sobic002G131500--Sobic004G121300 Sobic001G136800 Sobic001G136800 Sobic002G131500--Sobic001G136800 Sobic004G026500 Sobic004G026500 Sobic002G131500--Sobic004G026500 Sobic001G192000 Sobic001G192000 Sobic002G131500--Sobic001G192000 Sobic005G199400--Sobic001G136800 Sobic002G072400 Sobic002G072400 Sobic005G199400--Sobic002G072400 Sobic005G199400--Sobic002G131500 Sobic004G238200 Sobic004G238200 Sobic005G199400--Sobic004G238200 Sobic003G264800 Sobic003G264800 Sobic005G199400--Sobic003G264800 Sobic005G084800 Sobic005G084800 Sobic005G199400--Sobic005G084800 Sobic001G333500 Sobic001G333500 Sobic005G199400--Sobic001G333500 Sobic003G186900 Sobic003G186900 Sobic005G199400--Sobic003G186900 Sobic002G349100 Sobic002G349100 Sobic005G199400--Sobic002G349100 Sobic003G340600 Sobic003G340600 Sobic002G167500--Sobic003G340600 Sobic008G172300 Sobic008G172300 Sobic002G167500--Sobic008G172300 Sobic002G167500--Sobic003G311900 Sobic002G167500--Sobic002G131500 Sobic005G026000 Sobic005G026000 Sobic002G167500--Sobic005G026000 Sobic002G167500--Sobic004G026500 Sobic010G265300 Sobic010G265300 Sobic002G167500--Sobic010G265300 Sobic001G300100 Sobic001G300100 Sobic002G167500--Sobic001G300100 Sobic002G167500--Sobic001G136800 Sobic004G244900 Sobic004G244900 Sobic003G311900--Sobic004G244900 Sobic003G264100 Sobic003G264100 Sobic003G311900--Sobic003G264100 Sobic003G311900--Sobic002G167500 Sobic003G311900--Sobic001G192000 Sobic002G275700 Sobic002G275700 Sobic003G311900--Sobic002G275700 Sobic004G001500 Sobic004G001500 Sobic003G311900--Sobic004G001500 Sobic003G311900--Sobic005G026000 Sobic003G311900--Sobic001G355800 Sobic003G311900--Sobic001G136800 Sobic002G131200 Sobic002G131200 Sobic001G355800--Sobic002G131200 Sobic001G355800--Sobic001G192000 Sobic001G333100 Sobic001G333100 Sobic001G355800--Sobic001G333100 Sobic009G201300 Sobic009G201300 Sobic001G355800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G355800--Sobic003G354600 Sobic002G305000 Sobic002G305000 Sobic001G355800--Sobic002G305000 Sobic001G355800--Sobic003G311900 Sobic003G119600 Sobic003G119600 Sobic001G355800--Sobic003G119600 Sobic002G091600 Sobic002G091600 Sobic001G355800--Sobic002G091600 Sobic002G181600 Sobic002G181600 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic006G274800--Sobic002G131500 Sobic002G335000 Sobic002G335000 Sobic006G274800--Sobic002G335000 Sobic006G274800--Sobic005G199400 Sobic006G274800--Sobic004G121300 Sobic004G033700 Sobic004G033700 Sobic006G274800--Sobic004G033700 Sobic008G087900 Sobic008G087900 Sobic006G274800--Sobic008G087900 Sobic001G014800 Sobic001G014800 Sobic004G121300--Sobic001G014800 Sobic010G049100 Sobic010G049100 Sobic004G121300--Sobic010G049100 Sobic004G121300--Sobic001G333100 Sobic001G434200 Sobic001G434200 Sobic004G121300--Sobic001G434200 Sobic008G033500 Sobic008G033500 Sobic004G121300--Sobic008G033500 Sobic004G121300--Sobic002G131500 Sobic004G121300--Sobic006G274800 Sobic005G111900 Sobic005G111900 Sobic004G121300--Sobic005G111900 Sobic010G131900 Sobic010G131900 Sobic004G121300--Sobic010G131900 Sobic001G136800--Sobic003G354600 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic001G136800--Sobic003G264800 Sobic001G136800--Sobic004G244900 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic001G136800--Sobic003G311900 Sobic001G136800--Sobic002G091600 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic001G192000--Sobic002G275700 Sobic009G255700 Sobic009G255700 Sobic001G192000--Sobic009G255700 Sobic005G162500 Sobic005G162500 Sobic001G192000--Sobic005G162500 Sobic008G088872 Sobic008G088872 Sobic001G192000--Sobic008G088872 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G370900 Sobic001G370900 Sobic001G192000--Sobic001G370900 Sobic003G221400 Sobic003G221400 Sobic001G192000--Sobic003G221400
Octagon: transcription factors


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