Gene annotation
Transcriptome id Sobic.004G121300.1
Synonym Sb04g010120
Functional annotation ATP11 protein, expressed
UniProt C5XZN6
Pfam PF06644
Panther DB PTHR13126
NCBI CDD -
KEGG Orthology K07555; ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
Gene Ontology GO:0005739; mitochondrion


Orthologs (automatic annotation)
TAIR AT2G34050 : -
RAP-DB (Rice) LOC_Os02g20860.1 : ATP11 protein, expressed
MaizeGDB (Corn) Zm00025a019853
Brachypodium KQJ94610
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G121300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
2 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
3 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
4 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
5 Sobic.008G033500 nucleolar GTPase, putative, expressed -
6 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
8 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
10 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
11 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
12 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
13 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
14 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.001G355800 methyltransferase, putative, expressed -
16 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
17 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
18 Sobic.002G231500 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed K01923: phosphoribosylaminoimidazole-succinocarboxamide synthase
19 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
20 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN


Gene co-expression network
sample Sobic004G121300 Sobic004G121300 Sobic001G014800 Sobic001G014800 Sobic004G121300--Sobic001G014800 Sobic010G049100 Sobic010G049100 Sobic004G121300--Sobic010G049100 Sobic001G333100 Sobic001G333100 Sobic004G121300--Sobic001G333100 Sobic001G434200 Sobic001G434200 Sobic004G121300--Sobic001G434200 Sobic008G033500 Sobic008G033500 Sobic004G121300--Sobic008G033500 Sobic002G131500 Sobic002G131500 Sobic004G121300--Sobic002G131500 Sobic006G274800 Sobic006G274800 Sobic004G121300--Sobic006G274800 Sobic005G111900 Sobic005G111900 Sobic004G121300--Sobic005G111900 Sobic010G131900 Sobic010G131900 Sobic004G121300--Sobic010G131900 Sobic010G020400 Sobic010G020400 Sobic001G014800--Sobic010G020400 Sobic009G084000 Sobic009G084000 Sobic001G014800--Sobic009G084000 Sobic001G014800--Sobic008G033500 Sobic001G014800--Sobic001G333100 Sobic009G192000 Sobic009G192000 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic002G263600 Sobic002G263600 Sobic001G014800--Sobic002G263600 Sobic004G080100 Sobic004G080100 Sobic010G049100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic010G049100--Sobic003G246700 Sobic010G049100--Sobic001G014800 Sobic008G032600 Sobic008G032600 Sobic010G049100--Sobic008G032600 Sobic010G049100--Sobic004G121300 Sobic002G226900 Sobic002G226900 Sobic010G049100--Sobic002G226900 Sobic004G296400 Sobic004G296400 Sobic010G049100--Sobic004G296400 Sobic009G139900 Sobic009G139900 Sobic010G049100--Sobic009G139900 Sobic004G136300 Sobic004G136300 Sobic010G049100--Sobic004G136300 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic001G333100--Sobic008G033500 Sobic007G071900 Sobic007G071900 Sobic001G434200--Sobic007G071900 Sobic006G093300 Sobic006G093300 Sobic001G434200--Sobic006G093300 Sobic006G039400 Sobic006G039400 Sobic001G434200--Sobic006G039400 Sobic001G468600 Sobic001G468600 Sobic001G434200--Sobic001G468600 Sobic001G434200--Sobic001G333100 Sobic004G171200 Sobic004G171200 Sobic001G434200--Sobic004G171200 Sobic008G087900 Sobic008G087900 Sobic001G434200--Sobic008G087900 Sobic001G434200--Sobic004G121300 Sobic001G434200--Sobic001G014800 Sobic008G033500--Sobic010G020400 Sobic008G033500--Sobic001G014800 Sobic008G033500--Sobic001G333100 Sobic008G033500--Sobic002G020700 Sobic007G162100 Sobic007G162100 Sobic008G033500--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic008G033500--Sobic006G127600 Sobic003G422900 Sobic003G422900 Sobic008G033500--Sobic003G422900 Sobic009G068500 Sobic009G068500 Sobic008G033500--Sobic009G068500 Sobic001G193300 Sobic001G193300 Sobic008G033500--Sobic001G193300 Sobic005G199400 Sobic005G199400 Sobic002G131500--Sobic005G199400 Sobic002G167500 Sobic002G167500 Sobic002G131500--Sobic002G167500 Sobic003G311900 Sobic003G311900 Sobic002G131500--Sobic003G311900 Sobic001G355800 Sobic001G355800 Sobic002G131500--Sobic001G355800 Sobic002G131500--Sobic006G274800 Sobic002G131500--Sobic004G121300 Sobic001G136800 Sobic001G136800 Sobic002G131500--Sobic001G136800 Sobic004G026500 Sobic004G026500 Sobic002G131500--Sobic004G026500 Sobic002G131500--Sobic001G192000 Sobic002G181600 Sobic002G181600 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic003G354600 Sobic003G354600 Sobic006G274800--Sobic003G354600 Sobic006G274800--Sobic002G131500 Sobic002G335000 Sobic002G335000 Sobic006G274800--Sobic002G335000 Sobic006G274800--Sobic005G199400 Sobic006G274800--Sobic004G121300 Sobic004G033700 Sobic004G033700 Sobic006G274800--Sobic004G033700 Sobic006G274800--Sobic008G087900 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500 Sobic010G131900--Sobic009G084000 Sobic002G311100 Sobic002G311100 Sobic010G131900--Sobic002G311100 Sobic010G074300 Sobic010G074300 Sobic010G131900--Sobic010G074300 Sobic010G131900--Sobic002G263600 Sobic010G147100 Sobic010G147100 Sobic010G131900--Sobic010G147100 Sobic003G365300 Sobic003G365300 Sobic010G131900--Sobic003G365300 Sobic010G131900--Sobic009G068500 Sobic010G131900--Sobic003G264100 Sobic001G203900 Sobic001G203900 Sobic010G131900--Sobic001G203900
Octagon: transcription factors


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