Gene annotation
Transcriptome id Sobic.002G231500.1
Synonym PURC, ATPURC, Sb02g027070, PUR7
Functional annotation phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed
UniProt C5X302
Pfam PF01259
Panther DB PTHR11609 PTHR11609:SF9
NCBI CDD KOG2835; Phosphoribosylamidoimidazole-succinocarboxamide synthase
KEGG Orthology K01923; phosphoribosylaminoimidazole-succinocarboxamide synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21110 : purin 7
RAP-DB (Rice) LOC_Os09g29190.1 : phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043270 , Zm00025a011614
Brachypodium KQJ83306
Barley HORVU5Hr1G069800.10 , HORVU5Hr1G069800.6 , HORVU5Hr1G069800.7 , HORVU5Hr1G069800.4 , HORVU5Hr1G069800.5 , HORVU5Hr1G069800.2 , HORVU5Hr1G069800.3 , HORVU5Hr1G069800.1 , HORVU5Hr1G069800.8 , HORVU5Hr1G069800.9
Wheat TraesCS5D02G253900 , TraesCS5A02G247400 , TraesCS5B02G244500 , TraesCS5A02G247400
Populus -


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cDNA sequences
Sobic.002G231500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
2 Sobic.006G213400 bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
3 Sobic.001G382600 expressed protein -
4 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
5 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
6 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
7 Sobic.008G156700 phosphoribulokinase/Uridine kinase family protein, expressed -
8 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
9 Sobic.008G033500 nucleolar GTPase, putative, expressed -
10 Sobic.002G263600 expressed protein -
11 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
12 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
13 Sobic.004G017400 expressed protein -
14 Sobic.003G039000 GPI transamidase component Gpi16 subunit family protein, putative, expressed K05292: GPI-anchor transamidase subunit T
15 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
16 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
17 Sobic.005G034300 peptidyl-prolyl isomerase, putative, expressed -
18 Sobic.002G364800 COBW domain containing protein, putative, expressed -
19 Sobic.001G482900 glycosyl transferase, group 1 domain containing protein, expressed K03842: beta-1,4-mannosyltransferase
20 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5


Gene co-expression network
sample Sobic002G231500 Sobic002G231500 Sobic007G071900 Sobic007G071900 Sobic002G231500--Sobic007G071900 Sobic006G213400 Sobic006G213400 Sobic002G231500--Sobic006G213400 Sobic001G382600 Sobic001G382600 Sobic002G231500--Sobic001G382600 Sobic004G310500 Sobic004G310500 Sobic002G231500--Sobic004G310500 Sobic001G447300 Sobic001G447300 Sobic002G231500--Sobic001G447300 Sobic002G020700 Sobic002G020700 Sobic002G231500--Sobic002G020700 Sobic008G156700 Sobic008G156700 Sobic002G231500--Sobic008G156700 Sobic008G055900 Sobic008G055900 Sobic002G231500--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic002G231500--Sobic008G033500 Sobic007G071900--Sobic002G231500 Sobic009G075800 Sobic009G075800 Sobic007G071900--Sobic009G075800 Sobic001G434200 Sobic001G434200 Sobic007G071900--Sobic001G434200 Sobic001G455800 Sobic001G455800 Sobic007G071900--Sobic001G455800 Sobic007G071900--Sobic002G020700 Sobic004G257100 Sobic004G257100 Sobic007G071900--Sobic004G257100 Sobic001G333100 Sobic001G333100 Sobic007G071900--Sobic001G333100 Sobic003G221400 Sobic003G221400 Sobic007G071900--Sobic003G221400 Sobic003G375200 Sobic003G375200 Sobic007G071900--Sobic003G375200 Sobic006G213400--Sobic002G231500 Sobic008G190100 Sobic008G190100 Sobic006G213400--Sobic008G190100 Sobic006G213400--Sobic007G071900 Sobic006G043700 Sobic006G043700 Sobic006G213400--Sobic006G043700 Sobic008G088857 Sobic008G088857 Sobic006G213400--Sobic008G088857 Sobic009G072000 Sobic009G072000 Sobic006G213400--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic006G213400--Sobic009G249800 Sobic006G010400 Sobic006G010400 Sobic006G213400--Sobic006G010400 Sobic004G275600 Sobic004G275600 Sobic006G213400--Sobic004G275600 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic003G337300 Sobic003G337300 Sobic001G382600--Sobic003G337300 Sobic001G382600--Sobic002G020700 Sobic001G382600--Sobic008G055900 Sobic006G131000 Sobic006G131000 Sobic001G382600--Sobic006G131000 Sobic004G194900 Sobic004G194900 Sobic004G310500--Sobic004G194900 Sobic004G310500--Sobic009G075800 Sobic006G044600 Sobic006G044600 Sobic004G310500--Sobic006G044600 Sobic001G283200 Sobic001G283200 Sobic004G310500--Sobic001G283200 Sobic009G257600 Sobic009G257600 Sobic004G310500--Sobic009G257600 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic002G394600 Sobic002G394600 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic006G136400 Sobic006G136400 Sobic001G447300--Sobic006G136400 Sobic001G447300--Sobic008G055900 Sobic008G099800 Sobic008G099800 Sobic001G447300--Sobic008G099800 Sobic006G166200 Sobic006G166200 Sobic001G447300--Sobic006G166200 Sobic001G447300--Sobic001G455800 Sobic004G145000 Sobic004G145000 Sobic001G447300--Sobic004G145000 Sobic002G371700 Sobic002G371700 Sobic001G447300--Sobic002G371700 Sobic004G053500 Sobic004G053500 Sobic001G447300--Sobic004G053500 Sobic004G353000 Sobic004G353000 Sobic001G447300--Sobic004G353000 Sobic010G020400 Sobic010G020400 Sobic002G020700--Sobic010G020400 Sobic008G085700 Sobic008G085700 Sobic002G020700--Sobic008G085700 Sobic002G020700--Sobic008G055900 Sobic002G020700--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic002G020700--Sobic010G223300 Sobic001G449900 Sobic001G449900 Sobic002G020700--Sobic001G449900 Sobic004G039600 Sobic004G039600 Sobic002G020700--Sobic004G039600 Sobic008G082500 Sobic008G082500 Sobic002G020700--Sobic008G082500 Sobic007G054800 Sobic007G054800 Sobic002G020700--Sobic007G054800 Sobic007G098200 Sobic007G098200 Sobic008G156700--Sobic007G098200 Sobic008G032600 Sobic008G032600 Sobic008G156700--Sobic008G032600 Sobic002G364800 Sobic002G364800 Sobic008G156700--Sobic002G364800 Sobic008G156700--Sobic004G310500 Sobic008G156700--Sobic009G075800 Sobic008G156700--Sobic008G033500 Sobic008G156700--Sobic006G136400 Sobic002G262900 Sobic002G262900 Sobic008G156700--Sobic002G262900 Sobic002G226900 Sobic002G226900 Sobic008G156700--Sobic002G226900 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic008G055900--Sobic010G020400 Sobic008G055900--Sobic006G136400 Sobic008G055900--Sobic001G447300 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic008G033500--Sobic010G020400 Sobic001G014800 Sobic001G014800 Sobic008G033500--Sobic001G014800 Sobic008G033500--Sobic001G333100 Sobic008G033500--Sobic002G020700 Sobic007G162100 Sobic007G162100 Sobic008G033500--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic008G033500--Sobic006G127600 Sobic003G422900 Sobic003G422900 Sobic008G033500--Sobic003G422900 Sobic009G068500 Sobic009G068500 Sobic008G033500--Sobic009G068500 Sobic001G193300 Sobic001G193300 Sobic008G033500--Sobic001G193300
Octagon: transcription factors


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