Gene annotation
Transcriptome id Sobic.002G263600.1,Sobic.002G263600.2
Synonym Sb02g029820
Functional annotation expressed protein
UniProt A0A1W0W5X1 , C5X5E1
Pfam PF04910
Panther DB PTHR22684 PTHR22684:SF0
NCBI CDD KOG2422; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46900 : -
RAP-DB (Rice) LOC_Os09g33970.1 : expressed protein
MaizeGDB (Corn) Zm00025a014344
Brachypodium KQJ91014
Barley HORVU5Hr1G078760.4 , HORVU5Hr1G078760.1 , HORVU5Hr1G078760.3 , HORVU5Hr1G078760.2
Wheat TraesCS5D02G306700 , TraesCS5B02G299400 , TraesCS5A02G302100
Populus -


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cDNA sequences
Sobic.002G263600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
2 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
3 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
4 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
5 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
6 Sobic.009G222500 expressed protein -
7 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
8 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
9 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
10 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
11 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
12 Sobic.004G177300 SPRY-domain containing protein, putative, expressed -
13 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
14 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.003G195000 OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed K08955: ATP-dependent metalloprotease
16 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
17 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
18 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
19 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
20 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase


Gene co-expression network
sample Sobic002G263600 Sobic002G263600 Sobic002G142900 Sobic002G142900 Sobic002G263600--Sobic002G142900 Sobic010G020400 Sobic010G020400 Sobic002G263600--Sobic010G020400 Sobic010G131900 Sobic010G131900 Sobic002G263600--Sobic010G131900 Sobic009G075800 Sobic009G075800 Sobic002G263600--Sobic009G075800 Sobic003G046300 Sobic003G046300 Sobic002G263600--Sobic003G046300 Sobic009G222500 Sobic009G222500 Sobic002G263600--Sobic009G222500 Sobic001G014800 Sobic001G014800 Sobic002G263600--Sobic001G014800 Sobic006G196300 Sobic006G196300 Sobic002G263600--Sobic006G196300 Sobic002G008800 Sobic002G008800 Sobic002G263600--Sobic002G008800 Sobic004G131300 Sobic004G131300 Sobic002G142900--Sobic004G131300 Sobic001G263600 Sobic001G263600 Sobic002G142900--Sobic001G263600 Sobic002G133300 Sobic002G133300 Sobic002G142900--Sobic002G133300 Sobic003G195000 Sobic003G195000 Sobic002G142900--Sobic003G195000 Sobic007G054800 Sobic007G054800 Sobic002G142900--Sobic007G054800 Sobic005G162500 Sobic005G162500 Sobic002G142900--Sobic005G162500 Sobic003G104000 Sobic003G104000 Sobic002G142900--Sobic003G104000 Sobic002G256700 Sobic002G256700 Sobic002G142900--Sobic002G256700 Sobic002G335600 Sobic002G335600 Sobic002G142900--Sobic002G335600 Sobic002G020700 Sobic002G020700 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic010G020400--Sobic001G014800 Sobic010G020400--Sobic002G008800 Sobic008G055900 Sobic008G055900 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic010G020400--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic010G020400--Sobic010G223300 Sobic009G084000 Sobic009G084000 Sobic010G131900--Sobic009G084000 Sobic002G311100 Sobic002G311100 Sobic010G131900--Sobic002G311100 Sobic010G074300 Sobic010G074300 Sobic010G131900--Sobic010G074300 Sobic010G131900--Sobic002G263600 Sobic010G147100 Sobic010G147100 Sobic010G131900--Sobic010G147100 Sobic003G365300 Sobic003G365300 Sobic010G131900--Sobic003G365300 Sobic009G068500 Sobic009G068500 Sobic010G131900--Sobic009G068500 Sobic003G264100 Sobic003G264100 Sobic010G131900--Sobic003G264100 Sobic001G203900 Sobic001G203900 Sobic010G131900--Sobic001G203900 Sobic009G075800--Sobic009G222500 Sobic004G275700 Sobic004G275700 Sobic009G075800--Sobic004G275700 Sobic009G075800--Sobic010G020400 Sobic001G199100 Sobic001G199100 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic003G012200 Sobic003G012200 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic006G188500 Sobic006G188500 Sobic003G046300--Sobic006G188500 Sobic008G103300 Sobic008G103300 Sobic003G046300--Sobic008G103300 Sobic003G046300--Sobic002G142900 Sobic002G371700 Sobic002G371700 Sobic003G046300--Sobic002G371700 Sobic003G132000 Sobic003G132000 Sobic003G046300--Sobic003G132000 Sobic007G000200 Sobic007G000200 Sobic003G046300--Sobic007G000200 Sobic003G046300--Sobic002G263600 Sobic001G455800 Sobic001G455800 Sobic003G046300--Sobic001G455800 Sobic001G487100 Sobic001G487100 Sobic003G046300--Sobic001G487100 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic006G101700 Sobic006G101700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic001G014800--Sobic010G020400 Sobic001G014800--Sobic009G084000 Sobic001G014800--Sobic008G033500 Sobic001G014800--Sobic001G333100 Sobic009G192000 Sobic009G192000 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic001G014800--Sobic002G263600 Sobic006G196300--Sobic003G264100 Sobic002G405400 Sobic002G405400 Sobic006G196300--Sobic002G405400 Sobic006G196300--Sobic001G455800 Sobic006G196300--Sobic002G142900 Sobic006G196300--Sobic010G020400 Sobic006G196300--Sobic001G333100 Sobic001G227400 Sobic001G227400 Sobic006G196300--Sobic001G227400 Sobic004G241900 Sobic004G241900 Sobic006G196300--Sobic004G241900 Sobic002G303600 Sobic002G303600 Sobic006G196300--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic002G008800--Sobic010G261600 Sobic002G008800--Sobic010G020400 Sobic002G262900 Sobic002G262900 Sobic002G008800--Sobic002G262900 Sobic002G008800--Sobic010G223300 Sobic001G382600 Sobic001G382600 Sobic002G008800--Sobic001G382600 Sobic004G177300 Sobic004G177300 Sobic002G008800--Sobic004G177300 Sobic002G008800--Sobic004G275700 Sobic002G008800--Sobic001G333100 Sobic002G008800--Sobic008G055900
Octagon: transcription factors


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