Gene annotation
Transcriptome id Sobic.001G199100.4,Sobic.001G199100.2,Sobic.001G199100.3
Synonym MAP1A, Sb01g017550
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt A0A1B6QJW3 , A0A1B6QJW5
Pfam PF15801 PF00557
Panther DB PTHR10804 PTHR10804:SF13
NCBI CDD -
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45240 : methionine aminopeptidase 1A
RAP-DB (Rice) LOC_Os10g36470.2 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017463 , Zm00025a006372
Brachypodium KQJ97457
Barley HORVU1Hr1G047680.11 , HORVU1Hr1G047680.1 , HORVU1Hr1G047680.2 , HORVU1Hr1G047680.3 , HORVU1Hr1G047680.4 , HORVU1Hr1G047680.5 , HORVU1Hr1G047680.6 , HORVU1Hr1G047680.7 , HORVU1Hr1G047680.8 , HORVU1Hr1G047680.9 , HORVU1Hr1G047680.12 , HORVU1Hr1G047680.13 , HORVU1Hr1G047680.10
Wheat TraesCS1A02G180300 , TraesCS1A02G180300 , TraesCS1B02G200200 , TraesCS1B02G200200 , TraesCS1D02G178500 , TraesCS1D02G178500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
2 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
3 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
4 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
5 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
6 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
7 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
9 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
10 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
11 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
12 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
13 Sobic.003G338500 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
14 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
15 Sobic.002G263600 expressed protein -
16 Sobic.001G261436 - -
17 Sobic.005G034300 peptidyl-prolyl isomerase, putative, expressed -
18 Sobic.007G098200 - -
19 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
20 Sobic.006G103200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -


Gene co-expression network
sample Sobic001G199100 Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic001G199100--Sobic003G012200 Sobic004G275700 Sobic004G275700 Sobic001G199100--Sobic004G275700 Sobic009G075800 Sobic009G075800 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic001G199100--Sobic004G348300 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic004G275700--Sobic001G199100 Sobic004G275700--Sobic001G091300 Sobic004G275700--Sobic009G075800 Sobic002G262900 Sobic002G262900 Sobic004G275700--Sobic002G262900 Sobic001G007000 Sobic001G007000 Sobic004G275700--Sobic001G007000 Sobic010G020400 Sobic010G020400 Sobic004G275700--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic004G275700--Sobic002G008800 Sobic003G365300 Sobic003G365300 Sobic004G275700--Sobic003G365300 Sobic004G275700--Sobic003G012200 Sobic009G222500 Sobic009G222500 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic009G228700 Sobic009G228700 Sobic009G207000--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G207000--Sobic004G066200 Sobic009G207000--Sobic001G199100 Sobic001G323000 Sobic001G323000 Sobic009G207000--Sobic001G323000 Sobic009G207000--Sobic001G085100 Sobic006G249700 Sobic006G249700 Sobic009G207000--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G207000--Sobic006G148200 Sobic009G207000--Sobic010G000900 Sobic009G207000--Sobic003G012200 Sobic008G093000--Sobic001G199100 Sobic010G064600 Sobic010G064600 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic002G244100 Sobic002G244100 Sobic008G093000--Sobic002G244100 Sobic001G091300--Sobic009G228700 Sobic001G091300--Sobic003G312200 Sobic001G091300--Sobic004G275700 Sobic001G091300--Sobic004G066200 Sobic001G091300--Sobic001G085100 Sobic001G512300 Sobic001G512300 Sobic001G091300--Sobic001G512300 Sobic001G261436 Sobic001G261436 Sobic001G091300--Sobic001G261436 Sobic001G091300--Sobic001G199100 Sobic002G303600 Sobic002G303600 Sobic001G091300--Sobic002G303600 Sobic002G226900--Sobic009G075800 Sobic002G226900--Sobic004G275700 Sobic002G226900--Sobic003G012200 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic002G226900--Sobic010G000900 Sobic001G203900 Sobic001G203900 Sobic002G226900--Sobic001G203900 Sobic002G405400 Sobic002G405400 Sobic004G206700--Sobic002G405400 Sobic009G084000 Sobic009G084000 Sobic004G206700--Sobic009G084000 Sobic004G206700--Sobic001G199100 Sobic010G223300 Sobic010G223300 Sobic004G206700--Sobic010G223300 Sobic003G338500 Sobic003G338500 Sobic004G206700--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic004G206700--Sobic006G180000 Sobic009G123600 Sobic009G123600 Sobic004G206700--Sobic009G123600 Sobic002G059300 Sobic002G059300 Sobic004G206700--Sobic002G059300 Sobic004G194900 Sobic004G194900 Sobic004G206700--Sobic004G194900 Sobic004G348300--Sobic003G012200 Sobic004G348300--Sobic003G344900 Sobic004G348300--Sobic001G199100 Sobic002G352600 Sobic002G352600 Sobic004G348300--Sobic002G352600 Sobic004G348300--Sobic006G249700 Sobic004G006200 Sobic004G006200 Sobic004G348300--Sobic004G006200 Sobic004G348300--Sobic002G059300 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200
Octagon: transcription factors


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