Gene annotation
Transcriptome id Sobic.001G261436.1
Synonym -
Functional annotation -
UniProt C6JRS0 , A0A120GUR7
Pfam PF12874
Panther DB PTHR23067 PTHR23067:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61190 : putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain
RAP-DB (Rice) LOC_Os10g17740.1 : ZOS10-02 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a017961
Brachypodium PNT65607 , PNT65609 , PNT65608
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085100 expressed protein -
2 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
3 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
4 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
5 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
6 Sobic.009G228700 expressed protein -
7 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
8 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
9 Sobic.009G222500 expressed protein -
10 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
11 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
12 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
13 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
14 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
15 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
16 Sobic.010G164000 FYVE zinc finger domain containing protein, expressed -
17 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
18 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
19 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
20 Sobic.009G068500 expressed protein -


Gene co-expression network
sample Sobic001G261436 Sobic001G261436 Sobic001G085100 Sobic001G085100 Sobic001G261436--Sobic001G085100 Sobic001G047400 Sobic001G047400 Sobic001G261436--Sobic001G047400 Sobic003G312200 Sobic003G312200 Sobic001G261436--Sobic003G312200 Sobic001G091300 Sobic001G091300 Sobic001G261436--Sobic001G091300 Sobic004G275700 Sobic004G275700 Sobic001G261436--Sobic004G275700 Sobic009G228700 Sobic009G228700 Sobic001G261436--Sobic009G228700 Sobic001G007000 Sobic001G007000 Sobic001G261436--Sobic001G007000 Sobic009G192000 Sobic009G192000 Sobic001G261436--Sobic009G192000 Sobic009G222500 Sobic009G222500 Sobic001G261436--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic002G116900 Sobic002G116900 Sobic001G047400--Sobic002G116900 Sobic009G165800 Sobic009G165800 Sobic001G047400--Sobic009G165800 Sobic010G000900 Sobic010G000900 Sobic001G047400--Sobic010G000900 Sobic001G047400--Sobic001G085100 Sobic010G251000 Sobic010G251000 Sobic001G047400--Sobic010G251000 Sobic003G015900 Sobic003G015900 Sobic001G047400--Sobic003G015900 Sobic001G051200 Sobic001G051200 Sobic001G047400--Sobic001G051200 Sobic001G047400--Sobic001G261436 Sobic001G047400--Sobic009G228700 Sobic006G034000 Sobic006G034000 Sobic003G312200--Sobic006G034000 Sobic003G312200--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic003G312200--Sobic001G323000 Sobic003G312200--Sobic001G206900 Sobic003G312200--Sobic009G228700 Sobic003G312200--Sobic001G261436 Sobic003G312200--Sobic001G085100 Sobic010G130000 Sobic010G130000 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500 Sobic001G091300--Sobic009G228700 Sobic001G091300--Sobic003G312200 Sobic001G091300--Sobic004G275700 Sobic001G091300--Sobic004G066200 Sobic001G091300--Sobic001G085100 Sobic001G512300 Sobic001G512300 Sobic001G091300--Sobic001G512300 Sobic001G091300--Sobic001G261436 Sobic001G199100 Sobic001G199100 Sobic001G091300--Sobic001G199100 Sobic002G303600 Sobic002G303600 Sobic001G091300--Sobic002G303600 Sobic004G275700--Sobic001G199100 Sobic004G275700--Sobic001G091300 Sobic009G075800 Sobic009G075800 Sobic004G275700--Sobic009G075800 Sobic002G262900 Sobic002G262900 Sobic004G275700--Sobic002G262900 Sobic004G275700--Sobic001G007000 Sobic010G020400 Sobic010G020400 Sobic004G275700--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic004G275700--Sobic002G008800 Sobic003G365300 Sobic003G365300 Sobic004G275700--Sobic003G365300 Sobic004G275700--Sobic003G012200 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic009G068500 Sobic009G068500 Sobic001G007000--Sobic009G068500 Sobic001G007000--Sobic010G251000 Sobic001G392300 Sobic001G392300 Sobic001G007000--Sobic001G392300 Sobic002G359400 Sobic002G359400 Sobic001G007000--Sobic002G359400 Sobic004G353200 Sobic004G353200 Sobic001G007000--Sobic004G353200 Sobic010G205800 Sobic010G205800 Sobic001G007000--Sobic010G205800 Sobic008G046500 Sobic008G046500 Sobic001G007000--Sobic008G046500 Sobic001G080700 Sobic001G080700 Sobic001G007000--Sobic001G080700 Sobic001G031100 Sobic001G031100 Sobic001G007000--Sobic001G031100 Sobic009G192000--Sobic001G031100 Sobic009G192000--Sobic007G167900 Sobic009G192000--Sobic010G020400 Sobic003G349300 Sobic003G349300 Sobic009G192000--Sobic003G349300 Sobic001G014800 Sobic001G014800 Sobic009G192000--Sobic001G014800 Sobic003G338500 Sobic003G338500 Sobic009G192000--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic009G192000--Sobic006G180000 Sobic010G205300 Sobic010G205300 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000
Octagon: transcription factors


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