Gene annotation
Transcriptome id Sobic.009G222500.1
Synonym Sb09g027640
Functional annotation expressed protein
UniProt C5YV18
Pfam PF12348
Panther DB PTHR21567
NCBI CDD KOG2933; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14790 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os08g42189.2 : expressed protein
MaizeGDB (Corn) Zm00025a044469 , Zm00025a030435
Brachypodium PNT68499 , KQJ99145 , KQJ99147 , KQJ99146 , PNT68500
Barley HORVU7Hr1G054690.5 , HORVU7Hr1G054690.4 , HORVU7Hr1G054690.6 , HORVU7Hr1G054690.3 , HORVU7Hr1G054690.2
Wheat TraesCS7B02G159800 , TraesCS7A02G261300 , TraesCS7A02G261300 , TraesCS7D02G262900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
2 Sobic.006G049700 SAM domain family protein, expressed -
3 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
4 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
5 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
6 Sobic.007G166400 mediator of RNA polymerase II transcription subunit 31, putative, expressed K15153: MED31, mediator of RNA polymerase II transcription subunit 31
7 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
8 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
9 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
10 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
11 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
12 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
13 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
14 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
15 Sobic.002G263600 expressed protein -
16 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
17 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
18 Sobic.001G181700 expressed protein -
19 Sobic.002G192200 proteasome subunit, putative, expressed -
20 Sobic.001G261436 - -


Gene co-expression network
sample Sobic009G222500 Sobic009G222500 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic006G101700 Sobic006G101700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic009G075800--Sobic009G222500 Sobic004G275700 Sobic004G275700 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic001G199100 Sobic001G199100 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic003G012200 Sobic003G012200 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic006G049700--Sobic009G222500 Sobic006G049700--Sobic007G166400 Sobic006G049700--Sobic003G264200 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic001G080700--Sobic004G066200 Sobic001G080700--Sobic003G264200 Sobic001G080700--Sobic009G222500 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic006G101700--Sobic004G066200 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic006G101700--Sobic001G080700 Sobic006G101700--Sobic009G222500 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic001G356600 Sobic001G356600 Sobic004G066200--Sobic001G356600 Sobic009G228700 Sobic009G228700 Sobic004G066200--Sobic009G228700 Sobic004G066200--Sobic006G101700 Sobic004G066200--Sobic001G080700 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300 Sobic007G166400--Sobic006G101700 Sobic007G166400--Sobic003G264200 Sobic007G166400--Sobic009G222500 Sobic007G166400--Sobic006G049700 Sobic007G166400--Sobic007G167900 Sobic007G166400--Sobic004G066200 Sobic006G044600 Sobic006G044600 Sobic007G166400--Sobic006G044600 Sobic008G153500 Sobic008G153500 Sobic007G166400--Sobic008G153500 Sobic001G114500 Sobic001G114500 Sobic007G166400--Sobic001G114500 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic010G027600--Sobic004G066200 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic010G027600--Sobic002G192200 Sobic010G027600--Sobic009G228700 Sobic010G027600--Sobic006G049700 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic003G264200--Sobic006G049700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic004G235000--Sobic009G222500 Sobic006G092400 Sobic006G092400 Sobic004G235000--Sobic006G092400 Sobic003G214500 Sobic003G214500 Sobic004G235000--Sobic003G214500 Sobic003G220800 Sobic003G220800 Sobic004G235000--Sobic003G220800 Sobic004G235000--Sobic010G027600 Sobic001G007200 Sobic001G007200 Sobic004G235000--Sobic001G007200 Sobic004G235000--Sobic003G012200 Sobic004G086600 Sobic004G086600 Sobic004G235000--Sobic004G086600 Sobic009G084000 Sobic009G084000 Sobic004G235000--Sobic009G084000
Octagon: transcription factors


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