Gene annotation
Transcriptome id Sobic.004G235000.1
Synonym Sb04g027790
Functional annotation methyltransferase, putative, expressed
UniProt C5XYQ9
Pfam PF08241
Panther DB PTHR13069 PTHR13069:SF21
NCBI CDD KOG1331; Predicted methyltransferase
KEGG Orthology K10770; ALKBH8, alkylated DNA repair protein alkB homolog 8
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G36310 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g51490.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a022110 , Zm00025a016888
Brachypodium KQK01891
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G222500 expressed protein -
2 Sobic.006G092400 calmodulin binding protein, putative, expressed -
3 Sobic.003G214500 ubiquitin-like protein SMT3, putative, expressed -
4 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
5 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
6 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
7 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
8 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
9 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
10 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
11 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
12 Sobic.003G370900 expressed protein -
13 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
14 Sobic.001G181700 expressed protein -
15 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
16 Sobic.007G166100 no apical meristem protein, putative, expressed -
17 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
18 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
19 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
20 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein


Gene co-expression network
sample Sobic004G235000 Sobic004G235000 Sobic009G222500 Sobic009G222500 Sobic004G235000--Sobic009G222500 Sobic006G092400 Sobic006G092400 Sobic004G235000--Sobic006G092400 Sobic003G214500 Sobic003G214500 Sobic004G235000--Sobic003G214500 Sobic003G220800 Sobic003G220800 Sobic004G235000--Sobic003G220800 Sobic010G027600 Sobic010G027600 Sobic004G235000--Sobic010G027600 Sobic001G007200 Sobic001G007200 Sobic004G235000--Sobic001G007200 Sobic003G012200 Sobic003G012200 Sobic004G235000--Sobic003G012200 Sobic004G086600 Sobic004G086600 Sobic004G235000--Sobic004G086600 Sobic009G084000 Sobic009G084000 Sobic004G235000--Sobic009G084000 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic006G101700 Sobic006G101700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic009G222500--Sobic004G235000 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G209400 Sobic006G209400 Sobic006G092400--Sobic006G209400 Sobic010G074300 Sobic010G074300 Sobic006G092400--Sobic010G074300 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100 Sobic003G214500--Sobic004G235000 Sobic006G254100 Sobic006G254100 Sobic003G214500--Sobic006G254100 Sobic003G214500--Sobic009G084000 Sobic003G214500--Sobic003G220800 Sobic003G117900 Sobic003G117900 Sobic003G214500--Sobic003G117900 Sobic001G071800 Sobic001G071800 Sobic003G214500--Sobic001G071800 Sobic002G111200 Sobic002G111200 Sobic003G214500--Sobic002G111200 Sobic001G014800 Sobic001G014800 Sobic003G214500--Sobic001G014800 Sobic007G033800 Sobic007G033800 Sobic003G214500--Sobic007G033800 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G043300 Sobic003G043300 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic010G027600--Sobic004G066200 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic009G228700 Sobic009G228700 Sobic010G027600--Sobic009G228700 Sobic010G027600--Sobic006G049700 Sobic010G083700 Sobic010G083700 Sobic001G007200--Sobic010G083700 Sobic001G415500 Sobic001G415500 Sobic001G007200--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G007200--Sobic007G186300 Sobic010G253800 Sobic010G253800 Sobic001G007200--Sobic010G253800 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic009G246950 Sobic009G246950 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic001G199100 Sobic001G199100 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic007G168600 Sobic007G168600 Sobic004G086600--Sobic007G168600 Sobic007G045600 Sobic007G045600 Sobic004G086600--Sobic007G045600 Sobic004G086600--Sobic001G007200 Sobic001G502200 Sobic001G502200 Sobic004G086600--Sobic001G502200 Sobic006G232200 Sobic006G232200 Sobic004G086600--Sobic006G232200 Sobic001G461900 Sobic001G461900 Sobic004G086600--Sobic001G461900 Sobic003G124800 Sobic003G124800 Sobic004G086600--Sobic003G124800 Sobic004G086600--Sobic001G415500 Sobic003G015900 Sobic003G015900 Sobic004G086600--Sobic003G015900 Sobic009G084000--Sobic003G220800 Sobic010G131900 Sobic010G131900 Sobic009G084000--Sobic010G131900 Sobic009G084000--Sobic001G014800 Sobic004G206700 Sobic004G206700 Sobic009G084000--Sobic004G206700 Sobic004G054100 Sobic004G054100 Sobic009G084000--Sobic004G054100 Sobic009G084000--Sobic002G047700 Sobic002G263600 Sobic002G263600 Sobic009G084000--Sobic002G263600 Sobic009G084000--Sobic003G214500 Sobic009G084000--Sobic009G222500
Octagon: transcription factors


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