Gene annotation
Transcriptome id Sobic.006G092400.1
Synonym Sb06g017740
Functional annotation calmodulin binding protein, putative, expressed
UniProt C5Y968
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT2G18750 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os04g36660.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a031641 , Zm00025a020723 , Zm00025a011253
Brachypodium -
Barley HORVU2Hr1G077560.20 , HORVU2Hr1G077560.21 , HORVU2Hr1G077560.22 , HORVU2Hr1G077560.23 , HORVU2Hr1G077560.24 , HORVU2Hr1G077560.25 , HORVU2Hr1G077560.26 , HORVU2Hr1G077560.27 , HORVU2Hr1G077560.28 , HORVU2Hr1G077560.29 , HORVU2Hr1G077560.15 , HORVU2Hr1G077560.14 , HORVU2Hr1G077560.17 , HORVU2Hr1G077560.16 , HORVU2Hr1G077560.11 , HORVU2Hr1G077560.10 , HORVU2Hr1G077560.13 , HORVU2Hr1G077560.12 , HORVU2Hr1G077560.18 , HORVU2Hr1G077560.19 , HORVU2Hr1G077560.1 , HORVU2Hr1G077560.3 , HORVU2Hr1G077560.2 , HORVU2Hr1G077560.5 , HORVU2Hr1G077560.4 , HORVU2Hr1G077560.7 , HORVU2Hr1G077560.6 , HORVU2Hr1G077560.9 , HORVU2Hr1G077560.8 , HORVU2Hr1G077560.33 , HORVU2Hr1G077560.32 , HORVU2Hr1G077560.31 , HORVU2Hr1G077560.30 , HORVU2Hr1G077560.35 , HORVU2Hr1G077560.34
Wheat TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS2A02G311900 , TraesCS2A02G311900 , TraesCS2A02G311900 , TraesCS2D02G310200 , TraesCS2D02G310200 , TraesCS2D02G310200 , TraesCS2D02G310200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G179800 TBC domain containing protein, expressed -
2 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.010G074300 smr domain containing protein, expressed -
5 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
6 Sobic.001G508100 expressed protein -
7 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
8 Sobic.006G090000 DUF1771 domain containing protein, putative, expressed -
9 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
10 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
11 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
12 Sobic.010G174500 protein kinase family protein, putative, expressed -
13 Sobic.009G222500 expressed protein -
14 Sobic.002G352600 expressed protein -
15 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
16 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
17 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
18 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.007G166100 no apical meristem protein, putative, expressed -
20 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -


Gene co-expression network
sample Sobic006G092400 Sobic006G092400 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G209400 Sobic006G209400 Sobic006G092400--Sobic006G209400 Sobic010G074300 Sobic010G074300 Sobic006G092400--Sobic010G074300 Sobic004G235000 Sobic004G235000 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic003G220800 Sobic003G220800 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100 Sobic007G179800--Sobic006G092400 Sobic001G121200 Sobic001G121200 Sobic007G179800--Sobic001G121200 Sobic006G033200 Sobic006G033200 Sobic007G179800--Sobic006G033200 Sobic007G179800--Sobic003G220800 Sobic010G020300 Sobic010G020300 Sobic007G179800--Sobic010G020300 Sobic001G390800 Sobic001G390800 Sobic007G179800--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic007G179800--Sobic002G311100 Sobic007G179800--Sobic010G147100 Sobic003G312200 Sobic003G312200 Sobic007G179800--Sobic003G312200 Sobic002G130800--Sobic006G092400 Sobic001G137100 Sobic001G137100 Sobic002G130800--Sobic001G137100 Sobic004G118200 Sobic004G118200 Sobic002G130800--Sobic004G118200 Sobic002G130800--Sobic010G147100 Sobic006G090500 Sobic006G090500 Sobic002G130800--Sobic006G090500 Sobic010G228400 Sobic010G228400 Sobic002G130800--Sobic010G228400 Sobic004G233200 Sobic004G233200 Sobic002G130800--Sobic004G233200 Sobic009G217100 Sobic009G217100 Sobic002G130800--Sobic009G217100 Sobic001G481900 Sobic001G481900 Sobic002G130800--Sobic001G481900 Sobic006G209400--Sobic006G092400 Sobic003G295900 Sobic003G295900 Sobic006G209400--Sobic003G295900 Sobic002G290400 Sobic002G290400 Sobic006G209400--Sobic002G290400 Sobic001G541100 Sobic001G541100 Sobic006G209400--Sobic001G541100 Sobic001G031600 Sobic001G031600 Sobic006G209400--Sobic001G031600 Sobic009G165800 Sobic009G165800 Sobic006G209400--Sobic009G165800 Sobic001G395400 Sobic001G395400 Sobic006G209400--Sobic001G395400 Sobic003G076500 Sobic003G076500 Sobic006G209400--Sobic003G076500 Sobic010G116400 Sobic010G116400 Sobic006G209400--Sobic010G116400 Sobic010G074300--Sobic010G147100 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic009G222500 Sobic009G222500 Sobic004G235000--Sobic009G222500 Sobic004G235000--Sobic006G092400 Sobic003G214500 Sobic003G214500 Sobic004G235000--Sobic003G214500 Sobic004G235000--Sobic003G220800 Sobic010G027600 Sobic010G027600 Sobic004G235000--Sobic010G027600 Sobic001G007200 Sobic001G007200 Sobic004G235000--Sobic001G007200 Sobic003G012200 Sobic003G012200 Sobic004G235000--Sobic003G012200 Sobic004G086600 Sobic004G086600 Sobic004G235000--Sobic004G086600 Sobic009G084000 Sobic009G084000 Sobic004G235000--Sobic009G084000 Sobic010G242400 Sobic010G242400 Sobic001G508100--Sobic010G242400 Sobic001G508100--Sobic006G092400 Sobic001G508100--Sobic001G121200 Sobic004G116000 Sobic004G116000 Sobic001G508100--Sobic004G116000 Sobic006G160300 Sobic006G160300 Sobic001G508100--Sobic006G160300 Sobic004G067100 Sobic004G067100 Sobic001G508100--Sobic004G067100 Sobic001G181700 Sobic001G181700 Sobic001G508100--Sobic001G181700 Sobic001G508100--Sobic009G217100 Sobic003G086900 Sobic003G086900 Sobic001G508100--Sobic003G086900 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G043300 Sobic003G043300 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic002G166900 Sobic002G166900 Sobic006G090000--Sobic002G166900 Sobic006G090000--Sobic006G092400 Sobic010G000900 Sobic010G000900 Sobic006G090000--Sobic010G000900 Sobic006G090000--Sobic004G067100 Sobic001G414500 Sobic001G414500 Sobic006G090000--Sobic001G414500 Sobic003G077900 Sobic003G077900 Sobic006G090000--Sobic003G077900 Sobic006G090000--Sobic007G179800 Sobic004G321900 Sobic004G321900 Sobic006G090000--Sobic004G321900 Sobic001G283200 Sobic001G283200 Sobic006G090000--Sobic001G283200 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic010G147100--Sobic001G390800 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200
Octagon: transcription factors


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