Gene annotation
Transcriptome id Sobic.009G123600.2,Sobic.009G123600.1
Synonym Sb09g019120
Functional annotation tungus CG8253-PA, putative, expressed
UniProt A0A1B6P817 , C5YXF5
Pfam PF09764
Panther DB PTHR13035 PTHR13035:SF0
NCBI CDD KOG3261; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016811; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides


Orthologs (automatic annotation)
TAIR AT2G41760 : -
RAP-DB (Rice) LOC_Os05g32190.1 : tungus CG8253-PA, putative, expressed
MaizeGDB (Corn) Zm00025a043528
Brachypodium KQK06540
Barley -
Wheat TraesCS1A02G242200 , TraesCS1B02G253700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
2 Sobic.009G222500 expressed protein -
3 Sobic.001G085100 expressed protein -
4 Sobic.003G099100 ZOS9-05 - C2H2 zinc finger protein, expressed -
5 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
6 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
7 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
8 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
9 Sobic.007G166100 no apical meristem protein, putative, expressed -
10 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
11 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
12 Sobic.001G261436 - -
13 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
14 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
15 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
16 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
17 Sobic.004G194900 expressed protein -
18 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
19 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
20 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -


Gene co-expression network
sample Sobic009G123600 Sobic009G123600 Sobic002G059300 Sobic002G059300 Sobic009G123600--Sobic002G059300 Sobic009G222500 Sobic009G222500 Sobic009G123600--Sobic009G222500 Sobic001G085100 Sobic001G085100 Sobic009G123600--Sobic001G085100 Sobic003G099100 Sobic003G099100 Sobic009G123600--Sobic003G099100 Sobic001G199100 Sobic001G199100 Sobic009G123600--Sobic001G199100 Sobic001G512300 Sobic001G512300 Sobic009G123600--Sobic001G512300 Sobic004G206700 Sobic004G206700 Sobic009G123600--Sobic004G206700 Sobic003G012200 Sobic003G012200 Sobic009G123600--Sobic003G012200 Sobic007G166100 Sobic007G166100 Sobic009G123600--Sobic007G166100 Sobic002G059300--Sobic009G123600 Sobic001G121200 Sobic001G121200 Sobic002G059300--Sobic001G121200 Sobic001G067400 Sobic001G067400 Sobic002G059300--Sobic001G067400 Sobic009G056200 Sobic009G056200 Sobic002G059300--Sobic009G056200 Sobic002G059300--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic002G059300--Sobic004G348300 Sobic002G347000 Sobic002G347000 Sobic002G059300--Sobic002G347000 Sobic010G027600 Sobic010G027600 Sobic002G059300--Sobic010G027600 Sobic006G199200 Sobic006G199200 Sobic002G059300--Sobic006G199200 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic006G101700 Sobic006G101700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic001G085100--Sobic003G012200 Sobic003G099100--Sobic009G123600 Sobic002G385900 Sobic002G385900 Sobic003G099100--Sobic002G385900 Sobic004G202500 Sobic004G202500 Sobic003G099100--Sobic004G202500 Sobic003G099100--Sobic009G222500 Sobic003G099100--Sobic010G027600 Sobic009G135600 Sobic009G135600 Sobic003G099100--Sobic009G135600 Sobic003G099100--Sobic006G049700 Sobic010G278200 Sobic010G278200 Sobic003G099100--Sobic010G278200 Sobic004G115350 Sobic004G115350 Sobic003G099100--Sobic004G115350 Sobic001G199100--Sobic003G012200 Sobic004G275700 Sobic004G275700 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic001G199100--Sobic004G206700 Sobic001G199100--Sobic004G348300 Sobic001G512300--Sobic001G091300 Sobic001G512300--Sobic006G101700 Sobic002G281300 Sobic002G281300 Sobic001G512300--Sobic002G281300 Sobic001G512300--Sobic001G085100 Sobic001G512300--Sobic009G207000 Sobic001G360200 Sobic001G360200 Sobic001G512300--Sobic001G360200 Sobic001G512300--Sobic009G123600 Sobic001G512300--Sobic004G066200 Sobic003G007500 Sobic003G007500 Sobic001G512300--Sobic003G007500 Sobic002G405400 Sobic002G405400 Sobic004G206700--Sobic002G405400 Sobic009G084000 Sobic009G084000 Sobic004G206700--Sobic009G084000 Sobic004G206700--Sobic001G199100 Sobic010G223300 Sobic010G223300 Sobic004G206700--Sobic010G223300 Sobic003G338500 Sobic003G338500 Sobic004G206700--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic004G206700--Sobic006G180000 Sobic004G206700--Sobic009G123600 Sobic004G206700--Sobic002G059300 Sobic004G194900 Sobic004G194900 Sobic004G206700--Sobic004G194900 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic003G012200--Sobic001G047400 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic007G166100--Sobic010G000900 Sobic004G356900 Sobic004G356900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic007G166100--Sobic001G085100 Sobic007G166100--Sobic010G027600 Sobic007G166100--Sobic004G066200
Octagon: transcription factors


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