Gene annotation
Transcriptome id Sobic.003G372000.1
Synonym
Functional annotation proton-dependent oligopeptide transport, putative, expressed
UniProt A0A1B6Q792
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF179
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g65200.3 : proton-dependent oligopeptide transport, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK10819
Barley HORVU3Hr1G082360.20 , HORVU3Hr1G082380.14 , HORVU3Hr1G082380.12 , HORVU3Hr1G082380.13 , HORVU3Hr1G082380.10 , HORVU3Hr1G082380.11 , HORVU3Hr1G082380.9 , HORVU3Hr1G082360.9 , HORVU3Hr1G082360.14 , HORVU3Hr1G082360.15 , HORVU3Hr1G082360.16 , HORVU3Hr1G082360.17 , HORVU3Hr1G082360.10 , HORVU3Hr1G082360.12 , HORVU3Hr1G082360.13 , HORVU3Hr1G082380.4 , HORVU3Hr1G082380.5 , HORVU3Hr1G082380.6 , HORVU3Hr1G082380.7 , HORVU3Hr1G082380.1 , HORVU3Hr1G082380.2 , HORVU3Hr1G082380.3 , HORVU3Hr1G082380.8 , HORVU7Hr1G031040.1
Wheat TraesCS3A02G382800 , TraesCS3A02G382800 , TraesCS3D02G375300 , TraesCS3D02G375300 , TraesCS3A02G382700 , TraesCS3D02G375400 , TraesCS3D02G375400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085100 expressed protein -
2 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
4 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
5 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
6 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
7 Sobic.003G261400 DUF292 domain containing protein, expressed -
8 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
9 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
10 Sobic.004G348900 expressed protein -
11 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
12 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
13 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
14 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
15 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
16 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
17 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
18 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
19 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
20 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2


Gene co-expression network
sample Sobic003G372000 Sobic003G372000 Sobic001G085100 Sobic001G085100 Sobic003G372000--Sobic001G085100 Sobic005G044800 Sobic005G044800 Sobic003G372000--Sobic005G044800 Sobic003G012200 Sobic003G012200 Sobic003G372000--Sobic003G012200 Sobic001G283200 Sobic001G283200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic004G358600 Sobic004G358600 Sobic003G372000--Sobic004G358600 Sobic003G261400 Sobic003G261400 Sobic003G372000--Sobic003G261400 Sobic006G244700 Sobic006G244700 Sobic003G372000--Sobic006G244700 Sobic009G075800 Sobic009G075800 Sobic003G372000--Sobic009G075800 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic001G085100--Sobic003G012200 Sobic005G044800--Sobic004G358600 Sobic005G044800--Sobic003G012200 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic001G199100 Sobic001G199100 Sobic003G012200--Sobic001G199100 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic003G012200--Sobic001G047400 Sobic001G458700 Sobic001G458700 Sobic001G283200--Sobic001G458700 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic004G348900 Sobic004G348900 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic004G082900 Sobic004G082900 Sobic001G283200--Sobic004G082900 Sobic002G059300 Sobic002G059300 Sobic009G123600--Sobic002G059300 Sobic009G222500 Sobic009G222500 Sobic009G123600--Sobic009G222500 Sobic009G123600--Sobic001G085100 Sobic003G099100 Sobic003G099100 Sobic009G123600--Sobic003G099100 Sobic009G123600--Sobic001G199100 Sobic001G512300 Sobic001G512300 Sobic009G123600--Sobic001G512300 Sobic004G206700 Sobic004G206700 Sobic009G123600--Sobic004G206700 Sobic009G123600--Sobic003G012200 Sobic007G166100 Sobic007G166100 Sobic009G123600--Sobic007G166100 Sobic004G358600--Sobic005G044800 Sobic004G358600--Sobic003G012200 Sobic001G000200 Sobic001G000200 Sobic004G358600--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G358600--Sobic010G205800 Sobic010G002400 Sobic010G002400 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic002G361300 Sobic002G361300 Sobic004G358600--Sobic002G361300 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200 Sobic003G261400--Sobic001G283200 Sobic002G281300 Sobic002G281300 Sobic003G261400--Sobic002G281300 Sobic003G261500 Sobic003G261500 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic003G261400--Sobic001G458700 Sobic004G130900 Sobic004G130900 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic001G051200 Sobic001G051200 Sobic003G261400--Sobic001G051200 Sobic003G261400--Sobic010G000900 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900
Octagon: transcription factors


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