Gene annotation
Transcriptome id Sobic.005G044800.1
Synonym Sb05g003700
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5Y545
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF869
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51000 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g35520.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017500 , Zm00025a006456
Brachypodium KQJ97299
Barley HORVU2Hr1G116250.5 , HORVU2Hr1G116250.4 , HORVU2Hr1G116250.1 , HORVU2Hr1G116250.2 , HORVU1Hr1G044770.5 , HORVU1Hr1G044770.4 , HORVU1Hr1G044770.6 , HORVU1Hr1G044770.1 , HORVU1Hr1G044770.3 , HORVU1Hr1G044770.2 , HORVU2Hr1G116180.5 , HORVU2Hr1G116180.4 , HORVU2Hr1G116180.3 , HORVU2Hr1G116180.2 , HORVU1Hr1G044740.1 , HORVU1Hr1G044740.2 , HORVU1Hr1G044740.3
Wheat TraesCS2A02G526600 , TraesCS1A02G170600 , TraesCS1A02G170600 , TraesCS1B02G186700 , TraesCS1D02G168400 , TraesCS1B02G186600 , TraesCS2B02G556900 , TraesCS2D02G529300 , TraesCS1D02G168300 , TraesCS1D02G168300 , TraesCS1D02G168300 , TraesCS1D02G168300 , TraesCS1A02G170700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
2 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
3 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
4 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
5 Sobic.003G344900 selT-like protein precursor, putative, expressed -
6 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
7 Sobic.002G116900 expressed protein -
8 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
9 Sobic.003G055700 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
10 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
11 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
12 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
13 Sobic.010G000900 spotted leaf 11, putative, expressed -
14 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
15 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
16 Sobic.001G085100 expressed protein -
17 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
18 Sobic.003G376400 expressed protein -
19 Sobic.001G000200 TBC domain containing protein, expressed -
20 Sobic.002G393500 expressed protein -


Gene co-expression network
sample Sobic005G044800 Sobic005G044800 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic006G244700 Sobic006G244700 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic004G358600--Sobic005G044800 Sobic004G358600--Sobic003G012200 Sobic001G000200 Sobic001G000200 Sobic004G358600--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G358600--Sobic010G205800 Sobic010G002400 Sobic010G002400 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic002G361300 Sobic002G361300 Sobic004G358600--Sobic002G361300 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200 Sobic001G199100 Sobic001G199100 Sobic003G012200--Sobic001G199100 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic009G075800 Sobic009G075800 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic003G372000--Sobic001G085100 Sobic003G372000--Sobic005G044800 Sobic003G372000--Sobic003G012200 Sobic001G283200 Sobic001G283200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic003G372000--Sobic004G358600 Sobic003G261400 Sobic003G261400 Sobic003G372000--Sobic003G261400 Sobic003G372000--Sobic006G244700 Sobic003G372000--Sobic009G075800 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic003G344900--Sobic004G348300 Sobic003G344900--Sobic009G259400 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G339100 Sobic004G339100 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic002G116900--Sobic001G047400 Sobic004G296400 Sobic004G296400 Sobic002G116900--Sobic004G296400 Sobic010G251000 Sobic010G251000 Sobic002G116900--Sobic010G251000 Sobic005G168600 Sobic005G168600 Sobic002G116900--Sobic005G168600 Sobic009G165800 Sobic009G165800 Sobic002G116900--Sobic009G165800 Sobic004G183600 Sobic004G183600 Sobic002G116900--Sobic004G183600 Sobic010G051300 Sobic010G051300 Sobic002G116900--Sobic010G051300 Sobic001G270400 Sobic001G270400 Sobic002G116900--Sobic001G270400 Sobic002G116900--Sobic006G244700 Sobic002G166300 Sobic002G166300 Sobic003G273600--Sobic002G166300 Sobic003G273600--Sobic003G233600 Sobic001G079200 Sobic001G079200 Sobic003G273600--Sobic001G079200 Sobic003G273600--Sobic009G139900 Sobic003G273600--Sobic004G127700 Sobic003G273600--Sobic008G004600 Sobic003G273600--Sobic004G296400 Sobic003G273600--Sobic010G002400 Sobic003G273600--Sobic005G044800 Sobic007G136100 Sobic007G136100 Sobic003G055700--Sobic007G136100 Sobic003G055700--Sobic005G044800 Sobic001G219300 Sobic001G219300 Sobic003G055700--Sobic001G219300 Sobic003G055700--Sobic001G048200 Sobic003G055700--Sobic006G244700 Sobic008G032600 Sobic008G032600 Sobic003G055700--Sobic008G032600 Sobic003G055700--Sobic009G139900 Sobic003G055700--Sobic003G372000 Sobic004G080100 Sobic004G080100 Sobic003G055700--Sobic004G080100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.