Gene annotation
Transcriptome id Sobic.003G376400.1
Synonym Sb03g041630
Functional annotation expressed protein
UniProt C5XRE1
Pfam PF04616
Panther DB PTHR22925 PTHR22925:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G67540 : Arabinanase/levansucrase/invertase
RAP-DB (Rice) LOC_Os01g65720.1 : expressed protein
MaizeGDB (Corn) Zm00025a026580
Brachypodium PNT72925 , KQK09925 , KQK09927 , KQK09926
Barley HORVU3Hr1G074490.8 , HORVU3Hr1G074490.1 , HORVU3Hr1G074490.3 , HORVU3Hr1G074490.2 , HORVU3Hr1G074490.4 , HORVU3Hr1G074490.7 , HORVU3Hr1G074490.6
Wheat TraesCS3B02G337200 , TraesCS3A02G299300
Populus -


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cDNA sequences
Sobic.003G376400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
3 Sobic.004G301700 heat shock protein STI, putative, expressed K09553: stress-induced-phosphoprotein 1
4 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
6 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
7 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1
8 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
9 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
10 Sobic.002G143000 ubiquitin family protein, putative, expressed -
11 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
12 Sobic.006G222100 dehydrogenase, putative, expressed -
13 Sobic.008G118900 OsAPRL6 adenosine 5\'-phosphosulfate reductase-like OsAPRL6, expressed -
14 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
15 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.006G248400 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
18 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
19 Sobic.003G261500 lipase, putative, expressed -
20 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G376400 Sobic003G376400 Sobic005G044800 Sobic005G044800 Sobic003G376400--Sobic005G044800 Sobic002G166300 Sobic002G166300 Sobic003G376400--Sobic002G166300 Sobic004G301700 Sobic004G301700 Sobic003G376400--Sobic004G301700 Sobic001G057200 Sobic001G057200 Sobic003G376400--Sobic001G057200 Sobic010G123400 Sobic010G123400 Sobic003G376400--Sobic010G123400 Sobic006G177300 Sobic006G177300 Sobic003G376400--Sobic006G177300 Sobic004G081800 Sobic004G081800 Sobic003G376400--Sobic004G081800 Sobic006G244700 Sobic006G244700 Sobic003G376400--Sobic006G244700 Sobic003G372000 Sobic003G372000 Sobic003G376400--Sobic003G372000 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic002G166300--Sobic003G273600 Sobic003G233600 Sobic003G233600 Sobic002G166300--Sobic003G233600 Sobic009G139900 Sobic009G139900 Sobic002G166300--Sobic009G139900 Sobic004G296400 Sobic004G296400 Sobic002G166300--Sobic004G296400 Sobic001G079200 Sobic001G079200 Sobic002G166300--Sobic001G079200 Sobic009G199200 Sobic009G199200 Sobic002G166300--Sobic009G199200 Sobic008G004600 Sobic008G004600 Sobic002G166300--Sobic008G004600 Sobic001G000200 Sobic001G000200 Sobic002G166300--Sobic001G000200 Sobic004G136300 Sobic004G136300 Sobic002G166300--Sobic004G136300 Sobic002G317300 Sobic002G317300 Sobic004G301700--Sobic002G317300 Sobic004G301700--Sobic003G376400 Sobic003G226500 Sobic003G226500 Sobic004G301700--Sobic003G226500 Sobic010G057900 Sobic010G057900 Sobic004G301700--Sobic010G057900 Sobic004G301700--Sobic001G057200 Sobic001G281600 Sobic001G281600 Sobic004G301700--Sobic001G281600 Sobic010G146600 Sobic010G146600 Sobic004G301700--Sobic010G146600 Sobic006G101700 Sobic006G101700 Sobic004G301700--Sobic006G101700 Sobic009G050700 Sobic009G050700 Sobic004G301700--Sobic009G050700 Sobic001G057200--Sobic010G146600 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic010G249300 Sobic010G249300 Sobic001G057200--Sobic010G249300 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic010G123400--Sobic003G273600 Sobic010G123400--Sobic002G166300 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic006G000600 Sobic006G000600 Sobic006G177300--Sobic006G000600 Sobic006G177300--Sobic001G057200 Sobic001G366800 Sobic001G366800 Sobic006G177300--Sobic001G366800 Sobic001G242800 Sobic001G242800 Sobic006G177300--Sobic001G242800 Sobic006G177300--Sobic002G143000 Sobic002G259400 Sobic002G259400 Sobic006G177300--Sobic002G259400 Sobic006G179700 Sobic006G179700 Sobic006G177300--Sobic006G179700 Sobic006G177300--Sobic003G376400 Sobic001G322000 Sobic001G322000 Sobic006G177300--Sobic001G322000 Sobic001G458700 Sobic001G458700 Sobic004G081800--Sobic001G458700 Sobic003G261400 Sobic003G261400 Sobic004G081800--Sobic003G261400 Sobic002G341800 Sobic002G341800 Sobic004G081800--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic004G081800--Sobic004G224900 Sobic007G176200 Sobic007G176200 Sobic004G081800--Sobic007G176200 Sobic001G502200 Sobic001G502200 Sobic004G081800--Sobic001G502200 Sobic001G010700 Sobic001G010700 Sobic004G081800--Sobic001G010700 Sobic007G168600 Sobic007G168600 Sobic004G081800--Sobic007G168600 Sobic006G252200 Sobic006G252200 Sobic004G081800--Sobic006G252200 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic006G244700--Sobic004G081800 Sobic001G085100 Sobic001G085100 Sobic003G372000--Sobic001G085100 Sobic003G372000--Sobic005G044800 Sobic003G372000--Sobic003G012200 Sobic001G283200 Sobic001G283200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic003G372000--Sobic004G358600 Sobic003G372000--Sobic003G261400 Sobic003G372000--Sobic006G244700 Sobic009G075800 Sobic009G075800 Sobic003G372000--Sobic009G075800
Octagon: transcription factors


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