Gene annotation
Transcriptome id Sobic.006G222100.1
Synonym Sb06g029150
Functional annotation dehydrogenase, putative, expressed
UniProt C5YG81
Pfam PF08240 PF00107
Panther DB PTHR11695 PTHR11695:SF31
NCBI CDD KOG1198; Zinc-binding oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G56460 : GroES-like zinc-binding alcohol dehydrogenase family protein
RAP-DB (Rice) LOC_Os05g24880.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a009707
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G222100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
2 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
4 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
5 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
6 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
7 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
8 Sobic.002G361300 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
10 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
11 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
12 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
13 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
14 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
15 Sobic.009G174000 expressed protein -
16 Sobic.003G376400 expressed protein -
17 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
18 Sobic.005G168600 NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
19 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
20 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2


Gene co-expression network
sample Sobic006G222100 Sobic006G222100 Sobic006G176600 Sobic006G176600 Sobic006G222100--Sobic006G176600 Sobic005G044800 Sobic005G044800 Sobic006G222100--Sobic005G044800 Sobic010G193900 Sobic010G193900 Sobic006G222100--Sobic010G193900 Sobic003G273600 Sobic003G273600 Sobic006G222100--Sobic003G273600 Sobic010G123400 Sobic010G123400 Sobic006G222100--Sobic010G123400 Sobic006G239800 Sobic006G239800 Sobic006G222100--Sobic006G239800 Sobic006G244700 Sobic006G244700 Sobic006G222100--Sobic006G244700 Sobic002G361300 Sobic002G361300 Sobic006G222100--Sobic002G361300 Sobic003G299000 Sobic003G299000 Sobic006G222100--Sobic003G299000 Sobic002G294200 Sobic002G294200 Sobic006G176600--Sobic002G294200 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic001G049200 Sobic001G049200 Sobic006G176600--Sobic001G049200 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic007G136100 Sobic007G136100 Sobic006G176600--Sobic007G136100 Sobic003G012200 Sobic003G012200 Sobic006G176600--Sobic003G012200 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic010G193900--Sobic007G136100 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic010G193900--Sobic002G294200 Sobic004G173600 Sobic004G173600 Sobic010G193900--Sobic004G173600 Sobic002G114800 Sobic002G114800 Sobic010G193900--Sobic002G114800 Sobic004G081800 Sobic004G081800 Sobic010G193900--Sobic004G081800 Sobic001G283200 Sobic001G283200 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic002G166300 Sobic002G166300 Sobic003G273600--Sobic002G166300 Sobic003G233600 Sobic003G233600 Sobic003G273600--Sobic003G233600 Sobic001G079200 Sobic001G079200 Sobic003G273600--Sobic001G079200 Sobic009G139900 Sobic009G139900 Sobic003G273600--Sobic009G139900 Sobic003G273600--Sobic004G127700 Sobic008G004600 Sobic008G004600 Sobic003G273600--Sobic008G004600 Sobic004G296400 Sobic004G296400 Sobic003G273600--Sobic004G296400 Sobic003G273600--Sobic010G002400 Sobic003G273600--Sobic005G044800 Sobic010G123400--Sobic003G273600 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic010G123400--Sobic006G222100 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic006G157700 Sobic006G157700 Sobic006G239800--Sobic006G157700 Sobic006G239800--Sobic005G044800 Sobic001G057200 Sobic001G057200 Sobic006G239800--Sobic001G057200 Sobic006G239800--Sobic006G222100 Sobic009G177400 Sobic009G177400 Sobic006G239800--Sobic009G177400 Sobic010G274500 Sobic010G274500 Sobic006G239800--Sobic010G274500 Sobic006G239800--Sobic006G176600 Sobic003G354400 Sobic003G354400 Sobic006G239800--Sobic003G354400 Sobic001G120300 Sobic001G120300 Sobic006G239800--Sobic001G120300 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic006G244700--Sobic004G081800 Sobic001G394600 Sobic001G394600 Sobic002G361300--Sobic001G394600 Sobic009G257200 Sobic009G257200 Sobic002G361300--Sobic009G257200 Sobic010G205800 Sobic010G205800 Sobic002G361300--Sobic010G205800 Sobic001G127000 Sobic001G127000 Sobic002G361300--Sobic001G127000 Sobic007G120500 Sobic007G120500 Sobic002G361300--Sobic007G120500 Sobic009G224000 Sobic009G224000 Sobic002G361300--Sobic009G224000 Sobic001G114000 Sobic001G114000 Sobic002G361300--Sobic001G114000 Sobic004G039600 Sobic004G039600 Sobic002G361300--Sobic004G039600 Sobic002G361300--Sobic004G358600 Sobic003G077900 Sobic003G077900 Sobic003G299000--Sobic003G077900 Sobic004G348900 Sobic004G348900 Sobic003G299000--Sobic004G348900 Sobic001G206900 Sobic001G206900 Sobic003G299000--Sobic001G206900 Sobic003G436300 Sobic003G436300 Sobic003G299000--Sobic003G436300 Sobic004G227300 Sobic004G227300 Sobic003G299000--Sobic004G227300 Sobic001G417900 Sobic001G417900 Sobic003G299000--Sobic001G417900 Sobic002G418700 Sobic002G418700 Sobic003G299000--Sobic002G418700 Sobic003G217400 Sobic003G217400 Sobic003G299000--Sobic003G217400 Sobic002G242200 Sobic002G242200 Sobic003G299000--Sobic002G242200
Octagon: transcription factors


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