Gene annotation
Transcriptome id Sobic.006G239800.1
Synonym Sb06g030600, GLI1, NHO1
Functional annotation FGGY family of carbohydrate kinases, putative, expressed
UniProt C5Y921
Pfam PF00370 PF02782
Panther DB PTHR10196:SF69 PTHR10196
NCBI CDD -
KEGG Orthology K00864; glpK, glycerol kinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0016773phosphotransferase activity, alcohol group as acceptor


Orthologs (automatic annotation)
TAIR AT1G80460 : Actin-like ATPase superfamily protein
RAP-DB (Rice) LOC_Os04g55410.1 : FGGY family of carbohydrate kinases, putative, expressed
MaizeGDB (Corn) Zm00025a009555
Brachypodium KQJ84959
Barley HORVU2Hr1G114260.1
Wheat TraesCS2B02G544200 , TraesCS2A02G515700 , TraesCS2D02G517200
Populus -


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cDNA sequences
Sobic.006G239800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
2 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
4 Sobic.006G222100 dehydrogenase, putative, expressed -
5 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
6 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
7 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
8 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
9 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
10 Sobic.004G293000 MSP domain containing protein, expressed -
11 Sobic.002G175500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
12 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
13 Sobic.002G187300 calmodulin-binding protein, putative, expressed -
14 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.002G376300 FYVE zinc finger family protein, expressed -
16 Sobic.009G088100 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
18 Sobic.009G028800 OsFBX115 - F-box domain containing protein, expressed -
19 Sobic.005G086100 glutathione S-transferase, N-terminal domain containing protein, expressed K01800: maiA, maleylacetoacetate isomerase
20 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase


Gene co-expression network
sample Sobic006G239800 Sobic006G239800 Sobic006G157700 Sobic006G157700 Sobic006G239800--Sobic006G157700 Sobic005G044800 Sobic005G044800 Sobic006G239800--Sobic005G044800 Sobic001G057200 Sobic001G057200 Sobic006G239800--Sobic001G057200 Sobic006G222100 Sobic006G222100 Sobic006G239800--Sobic006G222100 Sobic009G177400 Sobic009G177400 Sobic006G239800--Sobic009G177400 Sobic010G274500 Sobic010G274500 Sobic006G239800--Sobic010G274500 Sobic006G176600 Sobic006G176600 Sobic006G239800--Sobic006G176600 Sobic003G354400 Sobic003G354400 Sobic006G239800--Sobic003G354400 Sobic001G120300 Sobic001G120300 Sobic006G239800--Sobic001G120300 Sobic006G157700--Sobic006G239800 Sobic006G127100 Sobic006G127100 Sobic006G157700--Sobic006G127100 Sobic005G024900 Sobic005G024900 Sobic006G157700--Sobic005G024900 Sobic003G241000 Sobic003G241000 Sobic006G157700--Sobic003G241000 Sobic003G241500 Sobic003G241500 Sobic006G157700--Sobic003G241500 Sobic003G061800 Sobic003G061800 Sobic006G157700--Sobic003G061800 Sobic002G175500 Sobic002G175500 Sobic006G157700--Sobic002G175500 Sobic006G157700--Sobic003G354400 Sobic004G345800 Sobic004G345800 Sobic006G157700--Sobic004G345800 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic006G244700 Sobic006G244700 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic010G249300 Sobic010G249300 Sobic001G057200--Sobic010G249300 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic006G222100--Sobic006G176600 Sobic006G222100--Sobic005G044800 Sobic010G193900 Sobic010G193900 Sobic006G222100--Sobic010G193900 Sobic006G222100--Sobic003G273600 Sobic010G123400 Sobic010G123400 Sobic006G222100--Sobic010G123400 Sobic006G222100--Sobic006G239800 Sobic006G222100--Sobic006G244700 Sobic002G361300 Sobic002G361300 Sobic006G222100--Sobic002G361300 Sobic003G299000 Sobic003G299000 Sobic006G222100--Sobic003G299000 Sobic002G114800 Sobic002G114800 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic009G177400--Sobic003G354400 Sobic009G177400--Sobic010G274500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic010G188400 Sobic010G188400 Sobic010G274500--Sobic010G188400 Sobic002G376300 Sobic002G376300 Sobic010G274500--Sobic002G376300 Sobic010G274500--Sobic009G177400 Sobic008G156300 Sobic008G156300 Sobic010G274500--Sobic008G156300 Sobic002G392700 Sobic002G392700 Sobic010G274500--Sobic002G392700 Sobic005G229166 Sobic005G229166 Sobic010G274500--Sobic005G229166 Sobic010G274500--Sobic001G120300 Sobic002G189400 Sobic002G189400 Sobic010G274500--Sobic002G189400 Sobic003G145900 Sobic003G145900 Sobic010G274500--Sobic003G145900 Sobic002G294200 Sobic002G294200 Sobic006G176600--Sobic002G294200 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic001G049200 Sobic001G049200 Sobic006G176600--Sobic001G049200 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic007G136100 Sobic007G136100 Sobic006G176600--Sobic007G136100 Sobic006G176600--Sobic003G012200 Sobic003G354400--Sobic003G061800 Sobic003G329400 Sobic003G329400 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic003G354400--Sobic008G144401 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic001G120300--Sobic004G127700 Sobic010G084000 Sobic010G084000 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic001G120300--Sobic002G092300
Octagon: transcription factors


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