Gene annotation
Transcriptome id Sobic.009G028800.1
Synonym Sb09g002420
Functional annotation OsFBX115 - F-box domain containing protein, expressed
UniProt A0A1B6P658
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF119
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03970 : F-box associated ubiquitination effector family protein
RAP-DB (Rice) LOC_Os04g08460.1 : OsFBX115 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT77919 , KQK21122 , KQK22956 , KQK22955 , PNT77916 , PNT77917 , PNT77918 , PNT77185 , KQK22926 , KQJ81771
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G031200 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
2 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
3 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
4 Sobic.001G078500 expressed protein -
5 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
6 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.003G344900 selT-like protein precursor, putative, expressed -
8 Sobic.006G242300 - -
9 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
10 Sobic.002G376300 FYVE zinc finger family protein, expressed -
11 Sobic.008G073600 PHD finger protein, putative, expressed -
12 Sobic.001G522900 expressed protein -
13 Sobic.002G202400 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
14 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
15 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
16 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
17 Sobic.003G381000 transcriptional regulator, putative, expressed -
18 Sobic.005G091600 aquaporin protein, putative, expressed K09875: aquaporin SIP
19 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
20 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein


Gene co-expression network
sample Sobic009G028800 Sobic009G028800 Sobic001G031200 Sobic001G031200 Sobic009G028800--Sobic001G031200 Sobic001G073000 Sobic001G073000 Sobic009G028800--Sobic001G073000 Sobic003G000800 Sobic003G000800 Sobic009G028800--Sobic003G000800 Sobic001G078500 Sobic001G078500 Sobic009G028800--Sobic001G078500 Sobic009G054700 Sobic009G054700 Sobic009G028800--Sobic009G054700 Sobic009G133400 Sobic009G133400 Sobic009G028800--Sobic009G133400 Sobic003G344900 Sobic003G344900 Sobic009G028800--Sobic003G344900 Sobic006G242300 Sobic006G242300 Sobic009G028800--Sobic006G242300 Sobic007G203700 Sobic007G203700 Sobic009G028800--Sobic007G203700 Sobic001G031200--Sobic009G054700 Sobic001G031200--Sobic009G028800 Sobic001G031200--Sobic003G000800 Sobic001G149700 Sobic001G149700 Sobic001G031200--Sobic001G149700 Sobic001G371300 Sobic001G371300 Sobic001G031200--Sobic001G371300 Sobic010G168600 Sobic010G168600 Sobic001G031200--Sobic010G168600 Sobic010G083700 Sobic010G083700 Sobic001G031200--Sobic010G083700 Sobic004G006300 Sobic004G006300 Sobic001G031200--Sobic004G006300 Sobic003G250500 Sobic003G250500 Sobic001G031200--Sobic003G250500 Sobic009G228800 Sobic009G228800 Sobic001G073000--Sobic009G228800 Sobic001G073000--Sobic010G083700 Sobic001G007200 Sobic001G007200 Sobic001G073000--Sobic001G007200 Sobic001G415500 Sobic001G415500 Sobic001G073000--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G073000--Sobic007G186300 Sobic001G054200 Sobic001G054200 Sobic001G073000--Sobic001G054200 Sobic009G246950 Sobic009G246950 Sobic001G073000--Sobic009G246950 Sobic010G253800 Sobic010G253800 Sobic001G073000--Sobic010G253800 Sobic003G248600 Sobic003G248600 Sobic001G073000--Sobic003G248600 Sobic003G000800--Sobic009G246950 Sobic003G000800--Sobic001G031200 Sobic003G000800--Sobic001G078500 Sobic004G253000 Sobic004G253000 Sobic003G000800--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G000800--Sobic001G512600 Sobic003G000800--Sobic001G371300 Sobic003G000800--Sobic010G083700 Sobic003G000800--Sobic001G149700 Sobic003G000800--Sobic007G186300 Sobic001G078500--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic001G078500--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic001G078500--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G078500--Sobic006G263900 Sobic004G339200 Sobic004G339200 Sobic001G078500--Sobic004G339200 Sobic001G078500--Sobic010G083700 Sobic001G078500--Sobic009G246950 Sobic001G078500--Sobic007G186300 Sobic002G400000 Sobic002G400000 Sobic001G078500--Sobic002G400000 Sobic009G054700--Sobic001G031200 Sobic002G132300 Sobic002G132300 Sobic009G054700--Sobic002G132300 Sobic009G054700--Sobic010G168600 Sobic002G256300 Sobic002G256300 Sobic009G054700--Sobic002G256300 Sobic002G202400 Sobic002G202400 Sobic009G054700--Sobic002G202400 Sobic004G034400 Sobic004G034400 Sobic009G054700--Sobic004G034400 Sobic010G067700 Sobic010G067700 Sobic009G054700--Sobic010G067700 Sobic008G128600 Sobic008G128600 Sobic009G054700--Sobic008G128600 Sobic004G104900 Sobic004G104900 Sobic009G054700--Sobic004G104900 Sobic004G356900 Sobic004G356900 Sobic009G133400--Sobic004G356900 Sobic009G133400--Sobic006G242300 Sobic010G146600 Sobic010G146600 Sobic009G133400--Sobic010G146600 Sobic004G348100 Sobic004G348100 Sobic009G133400--Sobic004G348100 Sobic004G301900 Sobic004G301900 Sobic009G133400--Sobic004G301900 Sobic010G247400 Sobic010G247400 Sobic009G133400--Sobic010G247400 Sobic010G251100 Sobic010G251100 Sobic009G133400--Sobic010G251100 Sobic009G133400--Sobic001G512600 Sobic009G133400--Sobic007G203700 Sobic003G012200 Sobic003G012200 Sobic003G344900--Sobic003G012200 Sobic010G000900 Sobic010G000900 Sobic003G344900--Sobic010G000900 Sobic004G348300 Sobic004G348300 Sobic003G344900--Sobic004G348300 Sobic009G259400 Sobic009G259400 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic001G047400 Sobic001G047400 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic001G041200 Sobic001G041200 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G056600 Sobic006G056600 Sobic006G242300--Sobic006G056600 Sobic006G242300--Sobic009G133400 Sobic003G119400 Sobic003G119400 Sobic006G242300--Sobic003G119400 Sobic001G067900 Sobic001G067900 Sobic006G242300--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic007G203700--Sobic009G246950 Sobic001G529000 Sobic001G529000 Sobic007G203700--Sobic001G529000 Sobic010G193800 Sobic010G193800 Sobic007G203700--Sobic010G193800 Sobic007G203700--Sobic006G263900 Sobic007G203700--Sobic002G256300 Sobic004G300900 Sobic004G300900 Sobic007G203700--Sobic004G300900 Sobic007G203700--Sobic001G054200 Sobic004G060600 Sobic004G060600 Sobic007G203700--Sobic004G060600 Sobic007G203700--Sobic001G078500
Octagon: transcription factors


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