Gene annotation
Transcriptome id Sobic.003G381000.1
Synonym Sb03g042070
Functional annotation transcriptional regulator, putative, expressed
UniProt C5XEN3
Pfam PF02622
Panther DB PTHR31984 PTHR31984:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33780 : Protein of unknown function (DUF179)
RAP-DB (Rice) LOC_Os01g66280.1 : transcriptional regulator, putative, expressed
MaizeGDB (Corn) Zm00025a039484
Brachypodium KQK10946
Barley HORVU3Hr1G090730.4 , HORVU3Hr1G090730.2 , HORVU3Hr1G090730.3 , HORVU3Hr1G090730.1
Wheat TraesCS3B02G437800 , TraesCS3A02G404300 , TraesCS3A02G404300
Populus -


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cDNA sequences
Sobic.003G381000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
2 Sobic.009G045800 bifunctional protein folD, putative, expressed -
3 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.006G262900 expressed protein -
5 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
6 Sobic.003G405900 mitochondrial import receptor subunit TOM20, putative, expressed -
7 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
8 Sobic.010G065400 X0001, putative, expressed -
9 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.007G095400 expressed protein -
11 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
12 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
13 Sobic.003G277000 expressed protein -
14 Sobic.004G265700 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
15 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
16 Sobic.001G078500 expressed protein -
17 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
18 Sobic.009G028800 OsFBX115 - F-box domain containing protein, expressed -
19 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
20 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1


Gene co-expression network
sample Sobic003G381000 Sobic003G381000 Sobic001G526100 Sobic001G526100 Sobic003G381000--Sobic001G526100 Sobic009G045800 Sobic009G045800 Sobic003G381000--Sobic009G045800 Sobic002G078400 Sobic002G078400 Sobic003G381000--Sobic002G078400 Sobic006G262900 Sobic006G262900 Sobic003G381000--Sobic006G262900 Sobic001G309500 Sobic001G309500 Sobic003G381000--Sobic001G309500 Sobic003G405900 Sobic003G405900 Sobic003G381000--Sobic003G405900 Sobic006G263900 Sobic006G263900 Sobic003G381000--Sobic006G263900 Sobic010G065400 Sobic010G065400 Sobic003G381000--Sobic010G065400 Sobic009G156300 Sobic009G156300 Sobic003G381000--Sobic009G156300 Sobic001G526100--Sobic001G309500 Sobic001G526100--Sobic002G078400 Sobic004G157800 Sobic004G157800 Sobic001G526100--Sobic004G157800 Sobic001G064800 Sobic001G064800 Sobic001G526100--Sobic001G064800 Sobic001G526100--Sobic010G065400 Sobic004G196300 Sobic004G196300 Sobic001G526100--Sobic004G196300 Sobic001G526100--Sobic003G381000 Sobic003G217100 Sobic003G217100 Sobic001G526100--Sobic003G217100 Sobic002G368400 Sobic002G368400 Sobic001G526100--Sobic002G368400 Sobic010G038700 Sobic010G038700 Sobic009G045800--Sobic010G038700 Sobic004G066800 Sobic004G066800 Sobic009G045800--Sobic004G066800 Sobic010G029400 Sobic010G029400 Sobic009G045800--Sobic010G029400 Sobic003G330500 Sobic003G330500 Sobic009G045800--Sobic003G330500 Sobic009G045800--Sobic003G405900 Sobic010G042800 Sobic010G042800 Sobic009G045800--Sobic010G042800 Sobic002G406500 Sobic002G406500 Sobic009G045800--Sobic002G406500 Sobic007G091000 Sobic007G091000 Sobic009G045800--Sobic007G091000 Sobic004G224900 Sobic004G224900 Sobic009G045800--Sobic004G224900 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic006G262900--Sobic009G198500 Sobic003G124800 Sobic003G124800 Sobic006G262900--Sobic003G124800 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic006G262900--Sobic001G054200 Sobic010G083700 Sobic010G083700 Sobic006G262900--Sobic010G083700 Sobic001G129300 Sobic001G129300 Sobic006G262900--Sobic001G129300 Sobic007G203700 Sobic007G203700 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic001G309500--Sobic002G078400 Sobic001G309500--Sobic003G217100 Sobic001G309500--Sobic001G526100 Sobic002G090700 Sobic002G090700 Sobic001G309500--Sobic002G090700 Sobic001G309500--Sobic008G132800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic003G405900--Sobic009G045800 Sobic003G405900--Sobic002G078400 Sobic001G491100 Sobic001G491100 Sobic003G405900--Sobic001G491100 Sobic003G405900--Sobic010G029400 Sobic003G405900--Sobic007G091000 Sobic006G242300 Sobic006G242300 Sobic003G405900--Sobic006G242300 Sobic001G018200 Sobic001G018200 Sobic003G405900--Sobic001G018200 Sobic003G405900--Sobic010G038700 Sobic008G094600 Sobic008G094600 Sobic003G405900--Sobic008G094600 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic010G253800 Sobic010G253800 Sobic006G263900--Sobic010G253800 Sobic009G246950 Sobic009G246950 Sobic006G263900--Sobic009G246950 Sobic003G007500 Sobic003G007500 Sobic006G263900--Sobic003G007500 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic001G502200 Sobic001G502200 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic010G065400--Sobic004G196300 Sobic010G065400--Sobic003G362400 Sobic005G111100 Sobic005G111100 Sobic010G065400--Sobic005G111100 Sobic010G065400--Sobic009G198500 Sobic002G117200 Sobic002G117200 Sobic009G156300--Sobic002G117200 Sobic004G352900 Sobic004G352900 Sobic009G156300--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic009G156300--Sobic001G285000 Sobic010G066300 Sobic010G066300 Sobic009G156300--Sobic010G066300 Sobic009G131100 Sobic009G131100 Sobic009G156300--Sobic009G131100 Sobic004G060600 Sobic004G060600 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic009G156300--Sobic010G065400
Octagon: transcription factors


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