Gene annotation
Transcriptome id Sobic.009G045800.1
Synonym Sb09g003920
Functional annotation bifunctional protein folD, putative, expressed
UniProt C5Z052
Pfam PF00763 PF02882
Panther DB PTHR10025 PTHR10025:SF33
NCBI CDD KOG0089; Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase
KEGG Orthology -
Gene Ontology GO:0009396; folic acid-containing compound biosynthetic process GO:0004488methylenetetrahydrofolate dehydrogenase (NADP+) activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G12290 : Amino acid dehydrogenase family protein
RAP-DB (Rice) LOC_Os05g05830.1 : bifunctional protein folD, putative, expressed
MaizeGDB (Corn) Zm00025a038083
Brachypodium PNT71801
Barley HORVU1Hr1G021690.1
Wheat TraesCS1D02G101200 , TraesCS1D02G101200 , TraesCS1A02G092700 , TraesCS1A02G092700 , TraesCS1B02G120300 , TraesCS1B02G120300
Populus -


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cDNA sequences
Sobic.009G045800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038700 expressed protein -
2 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
3 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
4 Sobic.003G330500 peptidase, T1 family, putative, expressed -
5 Sobic.003G405900 mitochondrial import receptor subunit TOM20, putative, expressed -
6 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
7 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
8 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
9 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
10 Sobic.001G018200 prohibitin-2, putative, expressed K17081: prohibitin 2
11 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
12 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
13 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
14 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
15 Sobic.004G334800 vacuolar protein sorting 55 family protein, putative, expressed -
16 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
17 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
18 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
19 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
20 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K


Gene co-expression network
sample Sobic009G045800 Sobic009G045800 Sobic010G038700 Sobic010G038700 Sobic009G045800--Sobic010G038700 Sobic004G066800 Sobic004G066800 Sobic009G045800--Sobic004G066800 Sobic010G029400 Sobic010G029400 Sobic009G045800--Sobic010G029400 Sobic003G330500 Sobic003G330500 Sobic009G045800--Sobic003G330500 Sobic003G405900 Sobic003G405900 Sobic009G045800--Sobic003G405900 Sobic010G042800 Sobic010G042800 Sobic009G045800--Sobic010G042800 Sobic002G406500 Sobic002G406500 Sobic009G045800--Sobic002G406500 Sobic007G091000 Sobic007G091000 Sobic009G045800--Sobic007G091000 Sobic004G224900 Sobic004G224900 Sobic009G045800--Sobic004G224900 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic010G038700--Sobic009G045800 Sobic001G018200 Sobic001G018200 Sobic010G038700--Sobic001G018200 Sobic010G038700--Sobic003G330500 Sobic004G262300 Sobic004G262300 Sobic010G038700--Sobic004G262300 Sobic001G481700 Sobic001G481700 Sobic010G038700--Sobic001G481700 Sobic008G127500 Sobic008G127500 Sobic010G038700--Sobic008G127500 Sobic009G168000 Sobic009G168000 Sobic010G038700--Sobic009G168000 Sobic001G025600 Sobic001G025600 Sobic010G038700--Sobic001G025600 Sobic003G129800 Sobic003G129800 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic007G092100 Sobic007G092100 Sobic004G066800--Sobic007G092100 Sobic010G154700 Sobic010G154700 Sobic004G066800--Sobic010G154700 Sobic005G111100 Sobic005G111100 Sobic004G066800--Sobic005G111100 Sobic001G513500 Sobic001G513500 Sobic004G066800--Sobic001G513500 Sobic003G155400 Sobic003G155400 Sobic004G066800--Sobic003G155400 Sobic009G191200 Sobic009G191200 Sobic004G066800--Sobic009G191200 Sobic008G132800 Sobic008G132800 Sobic010G029400--Sobic008G132800 Sobic002G078400 Sobic002G078400 Sobic010G029400--Sobic002G078400 Sobic003G025200 Sobic003G025200 Sobic010G029400--Sobic003G025200 Sobic010G029400--Sobic002G406500 Sobic002G115000 Sobic002G115000 Sobic010G029400--Sobic002G115000 Sobic005G157200 Sobic005G157200 Sobic010G029400--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic010G029400--Sobic008G058300 Sobic001G377800 Sobic001G377800 Sobic010G029400--Sobic001G377800 Sobic009G016201 Sobic009G016201 Sobic010G029400--Sobic009G016201 Sobic003G330500--Sobic004G224900 Sobic007G176200 Sobic007G176200 Sobic003G330500--Sobic007G176200 Sobic007G076300 Sobic007G076300 Sobic003G330500--Sobic007G076300 Sobic006G252200 Sobic006G252200 Sobic003G330500--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic003G330500--Sobic001G458700 Sobic001G010700 Sobic001G010700 Sobic003G330500--Sobic001G010700 Sobic001G502200 Sobic001G502200 Sobic003G330500--Sobic001G502200 Sobic004G138800 Sobic004G138800 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic003G405900--Sobic009G045800 Sobic003G405900--Sobic002G078400 Sobic001G491100 Sobic001G491100 Sobic003G405900--Sobic001G491100 Sobic003G405900--Sobic010G029400 Sobic003G405900--Sobic007G091000 Sobic006G242300 Sobic006G242300 Sobic003G405900--Sobic006G242300 Sobic003G405900--Sobic001G018200 Sobic003G405900--Sobic010G038700 Sobic008G094600 Sobic008G094600 Sobic003G405900--Sobic008G094600 Sobic004G310900 Sobic004G310900 Sobic010G042800--Sobic004G310900 Sobic002G263800 Sobic002G263800 Sobic010G042800--Sobic002G263800 Sobic010G042800--Sobic005G157200 Sobic010G042800--Sobic002G406500 Sobic010G042800--Sobic004G066800 Sobic004G032000 Sobic004G032000 Sobic010G042800--Sobic004G032000 Sobic001G331900 Sobic001G331900 Sobic010G042800--Sobic001G331900 Sobic010G042800--Sobic003G129800 Sobic001G128400 Sobic001G128400 Sobic010G042800--Sobic001G128400 Sobic001G085400 Sobic001G085400 Sobic002G406500--Sobic001G085400 Sobic002G406500--Sobic001G377800 Sobic001G436200 Sobic001G436200 Sobic002G406500--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic002G406500--Sobic002G056200 Sobic006G138100 Sobic006G138100 Sobic002G406500--Sobic006G138100 Sobic002G406500--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic002G406500--Sobic002G049300 Sobic002G047600 Sobic002G047600 Sobic002G406500--Sobic002G047600 Sobic002G304900 Sobic002G304900 Sobic002G406500--Sobic002G304900 Sobic007G091000--Sobic002G078400 Sobic003G362400 Sobic003G362400 Sobic007G091000--Sobic003G362400 Sobic007G091000--Sobic001G128400 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic004G224900--Sobic003G330500 Sobic004G224900--Sobic006G252200 Sobic004G224900--Sobic007G176200 Sobic004G224900--Sobic004G138800 Sobic004G224900--Sobic007G076300 Sobic004G224900--Sobic001G481700 Sobic004G224900--Sobic001G502200 Sobic004G224900--Sobic001G458700 Sobic001G236300 Sobic001G236300 Sobic004G224900--Sobic001G236300
Octagon: transcription factors


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