Gene annotation
Transcriptome id Sobic.001G018200.1
Synonym ATPHB1, Sb01g001770, PHB1
Functional annotation prohibitin-2, putative, expressed
UniProt C5WT18
Pfam PF01145
Panther DB PTHR23222 PTHR23222:SF4
NCBI CDD KOG3090; Prohibitin-like protein
KEGG Orthology K17081; prohibitin 2
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G03860 : prohibitin 2
RAP-DB (Rice) LOC_Os03g62490.1 : prohibitin-2, putative, expressed
MaizeGDB (Corn) Zm00025a008973
Brachypodium KQK12206 , KQK20202
Barley HORVU5Hr1G119700.1 , HORVU5Hr1G119470.2 , HORVU5Hr1G119470.1 , HORVU5Hr1G119700.2 , HORVU5Hr1G119700.3
Wheat TraesCS1A02G407100 , TraesCS4A02G344900 , TraesCS5D02G527100 , TraesCS4B02G383800 , TraesCS4A02G346300 , TraesCS5B02G528100
Populus -


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cDNA sequences
Sobic.001G018200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
2 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
3 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
4 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
5 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
6 Sobic.010G038700 expressed protein -
7 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
8 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
9 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
10 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
11 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
12 Sobic.008G094600 - -
13 Sobic.002G115000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
14 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
15 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
16 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
17 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
18 Sobic.009G045800 bifunctional protein folD, putative, expressed -
19 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
20 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae


Gene co-expression network
sample Sobic001G018200 Sobic001G018200 Sobic002G406500 Sobic002G406500 Sobic001G018200--Sobic002G406500 Sobic006G216600 Sobic006G216600 Sobic001G018200--Sobic006G216600 Sobic001G058900 Sobic001G058900 Sobic001G018200--Sobic001G058900 Sobic001G057300 Sobic001G057300 Sobic001G018200--Sobic001G057300 Sobic002G304900 Sobic002G304900 Sobic001G018200--Sobic002G304900 Sobic010G038700 Sobic010G038700 Sobic001G018200--Sobic010G038700 Sobic001G513500 Sobic001G513500 Sobic001G018200--Sobic001G513500 Sobic009G191200 Sobic009G191200 Sobic001G018200--Sobic009G191200 Sobic001G377800 Sobic001G377800 Sobic001G018200--Sobic001G377800 Sobic001G085400 Sobic001G085400 Sobic002G406500--Sobic001G085400 Sobic002G406500--Sobic001G377800 Sobic001G436200 Sobic001G436200 Sobic002G406500--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic002G406500--Sobic002G056200 Sobic006G138100 Sobic006G138100 Sobic002G406500--Sobic006G138100 Sobic002G115000 Sobic002G115000 Sobic002G406500--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic002G406500--Sobic002G049300 Sobic002G047600 Sobic002G047600 Sobic002G406500--Sobic002G047600 Sobic002G406500--Sobic002G304900 Sobic006G216600--Sobic001G085400 Sobic003G387900 Sobic003G387900 Sobic006G216600--Sobic003G387900 Sobic006G216600--Sobic002G304900 Sobic006G216600--Sobic001G057300 Sobic006G216600--Sobic002G049300 Sobic009G144300 Sobic009G144300 Sobic006G216600--Sobic009G144300 Sobic006G216600--Sobic002G115000 Sobic006G216600--Sobic002G047600 Sobic003G363800 Sobic003G363800 Sobic006G216600--Sobic003G363800 Sobic008G135000 Sobic008G135000 Sobic001G058900--Sobic008G135000 Sobic001G058900--Sobic002G304900 Sobic001G058900--Sobic002G115000 Sobic009G233400 Sobic009G233400 Sobic001G058900--Sobic009G233400 Sobic001G058900--Sobic001G085400 Sobic008G098800 Sobic008G098800 Sobic001G058900--Sobic008G098800 Sobic001G058900--Sobic002G049300 Sobic003G249700 Sobic003G249700 Sobic001G058900--Sobic003G249700 Sobic001G334300 Sobic001G334300 Sobic001G058900--Sobic001G334300 Sobic001G057300--Sobic006G216600 Sobic001G057300--Sobic002G304900 Sobic001G057300--Sobic008G135000 Sobic001G057300--Sobic001G058900 Sobic001G057300--Sobic001G334300 Sobic001G057300--Sobic001G085400 Sobic006G035900 Sobic006G035900 Sobic001G057300--Sobic006G035900 Sobic001G057300--Sobic002G115000 Sobic001G057300--Sobic003G387900 Sobic002G304900--Sobic001G085400 Sobic002G304900--Sobic009G233400 Sobic002G304900--Sobic001G058900 Sobic002G304900--Sobic001G334300 Sobic009G179100 Sobic009G179100 Sobic002G304900--Sobic009G179100 Sobic005G050500 Sobic005G050500 Sobic002G304900--Sobic005G050500 Sobic002G304900--Sobic003G387900 Sobic010G069400 Sobic010G069400 Sobic002G304900--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic002G304900--Sobic001G039400 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic009G045800 Sobic009G045800 Sobic010G038700--Sobic009G045800 Sobic010G038700--Sobic001G018200 Sobic003G330500 Sobic003G330500 Sobic010G038700--Sobic003G330500 Sobic004G262300 Sobic004G262300 Sobic010G038700--Sobic004G262300 Sobic001G481700 Sobic001G481700 Sobic010G038700--Sobic001G481700 Sobic008G127500 Sobic008G127500 Sobic010G038700--Sobic008G127500 Sobic009G168000 Sobic009G168000 Sobic010G038700--Sobic009G168000 Sobic001G025600 Sobic001G025600 Sobic010G038700--Sobic001G025600 Sobic001G011200 Sobic001G011200 Sobic001G513500--Sobic001G011200 Sobic001G513500--Sobic002G056200 Sobic003G129800 Sobic003G129800 Sobic001G513500--Sobic003G129800 Sobic001G513500--Sobic005G050500 Sobic001G513500--Sobic001G334300 Sobic001G513500--Sobic009G179100 Sobic004G310300 Sobic004G310300 Sobic001G513500--Sobic004G310300 Sobic005G091700 Sobic005G091700 Sobic001G513500--Sobic005G091700 Sobic010G100000 Sobic010G100000 Sobic001G513500--Sobic010G100000 Sobic009G191200--Sobic009G233400 Sobic009G191200--Sobic008G135000 Sobic009G191200--Sobic001G334300 Sobic009G191200--Sobic001G058900 Sobic009G191200--Sobic002G115000 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic009G191200--Sobic001G085400 Sobic009G191200--Sobic002G304900 Sobic001G377800--Sobic002G406500 Sobic004G104100 Sobic004G104100 Sobic001G377800--Sobic004G104100 Sobic001G377800--Sobic001G085400 Sobic001G091801 Sobic001G091801 Sobic001G377800--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic001G377800--Sobic007G019000 Sobic006G221200 Sobic006G221200 Sobic001G377800--Sobic006G221200 Sobic006G081100 Sobic006G081100 Sobic001G377800--Sobic006G081100 Sobic001G377800--Sobic002G049300 Sobic009G050300 Sobic009G050300 Sobic001G377800--Sobic009G050300
Octagon: transcription factors


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