Gene annotation
Transcriptome id Sobic.009G191200.1
Synonym Sb09g025000
Functional annotation 40S ribosomal protein S15, putative, expressed
UniProt C5Z0S9
Pfam PF00203
Panther DB PTHR11880 PTHR11880:SF10
NCBI CDD KOG0898; 40S ribosomal protein S15
KEGG Orthology K02958; RP-S15e, small subunit ribosomal protein S15e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT5G09500 : Ribosomal protein S19 family protein
RAP-DB (Rice) LOC_Os07g08660.1 : 40S ribosomal protein S15, putative, expressed
MaizeGDB (Corn) Zm00025a045198 , Zm00025a016076 , Zm00025a016077
Brachypodium KQK12684 , KQK20550
Barley -
Wheat TraesCS1B02G339400
Populus PNT15299 , PNT15300


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
2 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
3 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
4 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
5 Sobic.002G115000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
6 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
7 Sobic.003G280700 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
8 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
9 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
10 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
11 Sobic.010G069400 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
12 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
13 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
14 Sobic.005G050500 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
15 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
16 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
17 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
18 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
19 Sobic.009G115700 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e


Gene co-expression network
sample Sobic009G191200 Sobic009G191200 Sobic009G233400 Sobic009G233400 Sobic009G191200--Sobic009G233400 Sobic008G135000 Sobic008G135000 Sobic009G191200--Sobic008G135000 Sobic001G334300 Sobic001G334300 Sobic009G191200--Sobic001G334300 Sobic001G058900 Sobic001G058900 Sobic009G191200--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic009G191200--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic001G085400 Sobic001G085400 Sobic009G191200--Sobic001G085400 Sobic002G304900 Sobic002G304900 Sobic009G191200--Sobic002G304900 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic010G069400 Sobic010G069400 Sobic009G233400--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic009G233400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G233400--Sobic005G050500 Sobic009G233400--Sobic001G058900 Sobic003G249700 Sobic003G249700 Sobic009G233400--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic009G233400--Sobic003G109600 Sobic009G233400--Sobic001G085400 Sobic008G135000--Sobic001G058900 Sobic008G135000--Sobic009G233400 Sobic008G135000--Sobic002G304900 Sobic008G135000--Sobic002G115000 Sobic001G057300 Sobic001G057300 Sobic008G135000--Sobic001G057300 Sobic008G135000--Sobic009G191200 Sobic008G135000--Sobic001G334300 Sobic008G135000--Sobic001G085400 Sobic008G135000--Sobic010G069400 Sobic001G334300--Sobic009G233400 Sobic001G334300--Sobic002G304900 Sobic003G387900 Sobic003G387900 Sobic001G334300--Sobic003G387900 Sobic009G144300 Sobic009G144300 Sobic001G334300--Sobic009G144300 Sobic001G334300--Sobic001G085400 Sobic009G179100 Sobic009G179100 Sobic001G334300--Sobic009G179100 Sobic009G227400 Sobic009G227400 Sobic001G334300--Sobic009G227400 Sobic001G334300--Sobic005G050500 Sobic001G334300--Sobic002G049300 Sobic001G058900--Sobic008G135000 Sobic001G058900--Sobic002G304900 Sobic001G058900--Sobic002G115000 Sobic001G058900--Sobic009G233400 Sobic001G058900--Sobic001G085400 Sobic008G098800 Sobic008G098800 Sobic001G058900--Sobic008G098800 Sobic001G058900--Sobic002G049300 Sobic001G058900--Sobic003G249700 Sobic001G058900--Sobic001G334300 Sobic002G115000--Sobic001G085400 Sobic007G019000 Sobic007G019000 Sobic002G115000--Sobic007G019000 Sobic002G115000--Sobic001G058900 Sobic002G115000--Sobic002G304900 Sobic002G047600 Sobic002G047600 Sobic002G115000--Sobic002G047600 Sobic002G115000--Sobic003G249700 Sobic006G201500 Sobic006G201500 Sobic002G115000--Sobic006G201500 Sobic007G178600 Sobic007G178600 Sobic002G115000--Sobic007G178600 Sobic002G115000--Sobic002G049300 Sobic002G049300--Sobic001G085400 Sobic002G049300--Sobic007G178600 Sobic002G049300--Sobic002G047600 Sobic009G022400 Sobic009G022400 Sobic002G049300--Sobic009G022400 Sobic008G108601 Sobic008G108601 Sobic002G049300--Sobic008G108601 Sobic002G049300--Sobic003G249700 Sobic001G436200 Sobic001G436200 Sobic002G049300--Sobic001G436200 Sobic006G137100 Sobic006G137100 Sobic002G049300--Sobic006G137100 Sobic002G286900 Sobic002G286900 Sobic002G049300--Sobic002G286900 Sobic003G280700--Sobic002G049300 Sobic001G011200 Sobic001G011200 Sobic003G280700--Sobic001G011200 Sobic006G081100 Sobic006G081100 Sobic003G280700--Sobic006G081100 Sobic003G280700--Sobic005G050500 Sobic003G280700--Sobic001G085400 Sobic004G198400 Sobic004G198400 Sobic003G280700--Sobic004G198400 Sobic002G056200 Sobic002G056200 Sobic003G280700--Sobic002G056200 Sobic003G280700--Sobic009G022400 Sobic001G403500 Sobic001G403500 Sobic003G280700--Sobic001G403500 Sobic001G085400--Sobic002G115000 Sobic001G085400--Sobic002G304900 Sobic001G085400--Sobic002G049300 Sobic001G085400--Sobic002G047600 Sobic006G216600 Sobic006G216600 Sobic001G085400--Sobic006G216600 Sobic001G085400--Sobic003G249700 Sobic001G085400--Sobic003G387900 Sobic001G085400--Sobic007G178600 Sobic002G406500 Sobic002G406500 Sobic001G085400--Sobic002G406500 Sobic002G304900--Sobic001G085400 Sobic002G304900--Sobic009G233400 Sobic002G304900--Sobic001G058900 Sobic002G304900--Sobic001G334300 Sobic002G304900--Sobic009G179100 Sobic002G304900--Sobic005G050500 Sobic002G304900--Sobic003G387900 Sobic002G304900--Sobic010G069400 Sobic002G304900--Sobic001G039400
Octagon: transcription factors


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