Gene annotation
Transcriptome id Sobic.003G405900.1
Synonym TOM20-2, Sb03g044130
Functional annotation mitochondrial import receptor subunit TOM20, putative, expressed
UniProt C5XGB6
Pfam PF06552
Panther DB PTHR32409 PTHR32409:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005742; mitochondrial outer membrane translocase complex


Orthologs (automatic annotation)
TAIR AT1G27390 : translocase outer membrane 20-2
RAP-DB (Rice) LOC_Os01g69250.1 : mitochondrial import receptor subunit TOM20, putative, expressed
MaizeGDB (Corn) Zm00025a026252 , Zm00025a038594 , Zm00025a039287 , Zm00025a038000
Brachypodium KQK11261
Barley HORVU3Hr1G094550.4 , HORVU3Hr1G094550.2 , HORVU3Hr1G094550.3 , HORVU3Hr1G094550.1
Wheat TraesCS3A02G429800 , TraesCS3D02G425100 , TraesCS3B02G467700
Populus -


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cDNA sequences
Sobic.003G405900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G045800 bifunctional protein folD, putative, expressed -
2 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
3 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
4 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
5 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
6 Sobic.006G242300 - -
7 Sobic.001G018200 prohibitin-2, putative, expressed K17081: prohibitin 2
8 Sobic.010G038700 expressed protein -
9 Sobic.008G094600 - -
10 Sobic.008G132800 expressed protein -
11 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
12 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
13 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
14 Sobic.009G168000 selT-like protein precursor, putative, expressed -
15 Sobic.003G127300 expressed protein -
16 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
17 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
18 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14
19 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
20 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5


Gene co-expression network
sample Sobic003G405900 Sobic003G405900 Sobic009G045800 Sobic009G045800 Sobic003G405900--Sobic009G045800 Sobic002G078400 Sobic002G078400 Sobic003G405900--Sobic002G078400 Sobic001G491100 Sobic001G491100 Sobic003G405900--Sobic001G491100 Sobic010G029400 Sobic010G029400 Sobic003G405900--Sobic010G029400 Sobic007G091000 Sobic007G091000 Sobic003G405900--Sobic007G091000 Sobic006G242300 Sobic006G242300 Sobic003G405900--Sobic006G242300 Sobic001G018200 Sobic001G018200 Sobic003G405900--Sobic001G018200 Sobic010G038700 Sobic010G038700 Sobic003G405900--Sobic010G038700 Sobic008G094600 Sobic008G094600 Sobic003G405900--Sobic008G094600 Sobic009G045800--Sobic010G038700 Sobic004G066800 Sobic004G066800 Sobic009G045800--Sobic004G066800 Sobic009G045800--Sobic010G029400 Sobic003G330500 Sobic003G330500 Sobic009G045800--Sobic003G330500 Sobic009G045800--Sobic003G405900 Sobic010G042800 Sobic010G042800 Sobic009G045800--Sobic010G042800 Sobic002G406500 Sobic002G406500 Sobic009G045800--Sobic002G406500 Sobic009G045800--Sobic007G091000 Sobic004G224900 Sobic004G224900 Sobic009G045800--Sobic004G224900 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic009G174900 Sobic009G174900 Sobic001G491100--Sobic009G174900 Sobic007G019100 Sobic007G019100 Sobic001G491100--Sobic007G019100 Sobic001G481700 Sobic001G481700 Sobic001G491100--Sobic001G481700 Sobic001G025600 Sobic001G025600 Sobic001G491100--Sobic001G025600 Sobic003G196800 Sobic003G196800 Sobic001G491100--Sobic003G196800 Sobic001G491100--Sobic002G078400 Sobic009G004400 Sobic009G004400 Sobic001G491100--Sobic009G004400 Sobic001G502200 Sobic001G502200 Sobic001G491100--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic001G491100--Sobic008G137600 Sobic010G029400--Sobic008G132800 Sobic010G029400--Sobic002G078400 Sobic003G025200 Sobic003G025200 Sobic010G029400--Sobic003G025200 Sobic010G029400--Sobic002G406500 Sobic002G115000 Sobic002G115000 Sobic010G029400--Sobic002G115000 Sobic005G157200 Sobic005G157200 Sobic010G029400--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic010G029400--Sobic008G058300 Sobic001G377800 Sobic001G377800 Sobic010G029400--Sobic001G377800 Sobic009G016201 Sobic009G016201 Sobic010G029400--Sobic009G016201 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic001G041200 Sobic001G041200 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G056600 Sobic006G056600 Sobic006G242300--Sobic006G056600 Sobic009G133400 Sobic009G133400 Sobic006G242300--Sobic009G133400 Sobic003G119400 Sobic003G119400 Sobic006G242300--Sobic003G119400 Sobic001G067900 Sobic001G067900 Sobic006G242300--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic001G018200--Sobic002G406500 Sobic006G216600 Sobic006G216600 Sobic001G018200--Sobic006G216600 Sobic001G058900 Sobic001G058900 Sobic001G018200--Sobic001G058900 Sobic001G057300 Sobic001G057300 Sobic001G018200--Sobic001G057300 Sobic002G304900 Sobic002G304900 Sobic001G018200--Sobic002G304900 Sobic001G018200--Sobic010G038700 Sobic001G513500 Sobic001G513500 Sobic001G018200--Sobic001G513500 Sobic009G191200 Sobic009G191200 Sobic001G018200--Sobic009G191200 Sobic001G018200--Sobic001G377800 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic010G038700--Sobic009G045800 Sobic010G038700--Sobic001G018200 Sobic010G038700--Sobic003G330500 Sobic004G262300 Sobic004G262300 Sobic010G038700--Sobic004G262300 Sobic010G038700--Sobic001G481700 Sobic008G127500 Sobic008G127500 Sobic010G038700--Sobic008G127500 Sobic009G168000 Sobic009G168000 Sobic010G038700--Sobic009G168000 Sobic010G038700--Sobic001G025600 Sobic008G098800 Sobic008G098800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic008G094600--Sobic001G058900 Sobic003G129800 Sobic003G129800 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G100000 Sobic008G100000 Sobic008G094600--Sobic008G100000 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300
Octagon: transcription factors


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