Gene annotation
Transcriptome id Sobic.003G127300.1
Synonym Sb03g010770
Functional annotation expressed protein
UniProt C5XGM4
Pfam -
Panther DB PTHR13002
NCBI CDD KOG4608; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63000 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os01g16510.1 : expressed protein
MaizeGDB (Corn) Zm00025a035241
Brachypodium KQK03848
Barley HORVU3Hr1G038350.6 , HORVU3Hr1G038350.7 , HORVU3Hr1G038350.4 , HORVU3Hr1G038350.5 , HORVU3Hr1G038350.2 , HORVU3Hr1G038350.3 , HORVU3Hr1G038350.1 , HORVU3Hr1G038350.8 , HORVU3Hr1G038350.9
Wheat TraesCS3D02G190100 , TraesCS3D02G190100 , TraesCS3B02G215700 , TraesCS3A02G186100 , TraesCS3B02G215700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199700 expressed protein -
2 Sobic.001G364600 transmembrane protein 85, putative, expressed -
3 Sobic.002G298300 ubiquitin-related modifier 1, putative, expressed K12161: ubiquitin related modifier 1
4 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
5 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
6 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
7 Sobic.002G242200 expressed protein -
8 Sobic.003G405900 mitochondrial import receptor subunit TOM20, putative, expressed -
9 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
10 Sobic.001G332300 expressed protein -
11 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
12 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
13 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
14 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
15 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
16 Sobic.007G079700 pentatricopeptide, putative, expressed -
17 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
18 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
19 Sobic.004G348900 expressed protein -
20 Sobic.001G430800 GA17271-PA, putative, expressed -


Gene co-expression network
sample Sobic003G127300 Sobic003G127300 Sobic009G199700 Sobic009G199700 Sobic003G127300--Sobic009G199700 Sobic001G364600 Sobic001G364600 Sobic003G127300--Sobic001G364600 Sobic002G298300 Sobic002G298300 Sobic003G127300--Sobic002G298300 Sobic001G341500 Sobic001G341500 Sobic003G127300--Sobic001G341500 Sobic004G060600 Sobic004G060600 Sobic003G127300--Sobic004G060600 Sobic004G074300 Sobic004G074300 Sobic003G127300--Sobic004G074300 Sobic002G242200 Sobic002G242200 Sobic003G127300--Sobic002G242200 Sobic003G405900 Sobic003G405900 Sobic003G127300--Sobic003G405900 Sobic008G137600 Sobic008G137600 Sobic003G127300--Sobic008G137600 Sobic009G199700--Sobic003G127300 Sobic007G203700 Sobic007G203700 Sobic009G199700--Sobic007G203700 Sobic009G199700--Sobic002G298300 Sobic002G368400 Sobic002G368400 Sobic009G199700--Sobic002G368400 Sobic007G079700 Sobic007G079700 Sobic009G199700--Sobic007G079700 Sobic009G246950 Sobic009G246950 Sobic009G199700--Sobic009G246950 Sobic009G199700--Sobic004G060600 Sobic002G123200 Sobic002G123200 Sobic009G199700--Sobic002G123200 Sobic002G078400 Sobic002G078400 Sobic009G199700--Sobic002G078400 Sobic010G277100 Sobic010G277100 Sobic001G364600--Sobic010G277100 Sobic007G168600 Sobic007G168600 Sobic001G364600--Sobic007G168600 Sobic001G364600--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic001G364600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic001G364600--Sobic002G400000 Sobic003G050600 Sobic003G050600 Sobic001G364600--Sobic003G050600 Sobic001G364600--Sobic003G127300 Sobic009G004600 Sobic009G004600 Sobic001G364600--Sobic009G004600 Sobic001G314500 Sobic001G314500 Sobic001G364600--Sobic001G314500 Sobic002G298300--Sobic009G199700 Sobic002G298300--Sobic003G127300 Sobic002G298300--Sobic004G060600 Sobic002G298300--Sobic002G078400 Sobic004G352900 Sobic004G352900 Sobic002G298300--Sobic004G352900 Sobic010G090900 Sobic010G090900 Sobic002G298300--Sobic010G090900 Sobic009G156300 Sobic009G156300 Sobic002G298300--Sobic009G156300 Sobic002G266800 Sobic002G266800 Sobic002G298300--Sobic002G266800 Sobic001G147100 Sobic001G147100 Sobic002G298300--Sobic001G147100 Sobic007G167900 Sobic007G167900 Sobic001G341500--Sobic007G167900 Sobic001G207500 Sobic001G207500 Sobic001G341500--Sobic001G207500 Sobic003G374000 Sobic003G374000 Sobic001G341500--Sobic003G374000 Sobic009G192000 Sobic009G192000 Sobic001G341500--Sobic009G192000 Sobic006G049700 Sobic006G049700 Sobic001G341500--Sobic006G049700 Sobic001G206900 Sobic001G206900 Sobic001G341500--Sobic001G206900 Sobic009G149500 Sobic009G149500 Sobic001G341500--Sobic009G149500 Sobic004G092500 Sobic004G092500 Sobic001G341500--Sobic004G092500 Sobic001G341500--Sobic003G127300 Sobic004G060600--Sobic003G077900 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic004G060600--Sobic001G364600 Sobic002G268400 Sobic002G268400 Sobic004G074300--Sobic002G268400 Sobic003G119400 Sobic003G119400 Sobic004G074300--Sobic003G119400 Sobic001G152000 Sobic001G152000 Sobic004G074300--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic004G074300--Sobic009G033900 Sobic001G263000 Sobic001G263000 Sobic004G074300--Sobic001G263000 Sobic002G259400 Sobic002G259400 Sobic004G074300--Sobic002G259400 Sobic010G057900 Sobic010G057900 Sobic004G074300--Sobic010G057900 Sobic004G077600 Sobic004G077600 Sobic004G074300--Sobic004G077600 Sobic006G054500 Sobic006G054500 Sobic004G074300--Sobic006G054500 Sobic007G097900 Sobic007G097900 Sobic002G242200--Sobic007G097900 Sobic005G160400 Sobic005G160400 Sobic002G242200--Sobic005G160400 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic010G092300 Sobic010G092300 Sobic002G242200--Sobic010G092300 Sobic002G242200--Sobic001G207500 Sobic010G265300 Sobic010G265300 Sobic002G242200--Sobic010G265300 Sobic004G318000 Sobic004G318000 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic009G045800 Sobic009G045800 Sobic003G405900--Sobic009G045800 Sobic003G405900--Sobic002G078400 Sobic001G491100 Sobic001G491100 Sobic003G405900--Sobic001G491100 Sobic010G029400 Sobic010G029400 Sobic003G405900--Sobic010G029400 Sobic007G091000 Sobic007G091000 Sobic003G405900--Sobic007G091000 Sobic006G242300 Sobic006G242300 Sobic003G405900--Sobic006G242300 Sobic001G018200 Sobic001G018200 Sobic003G405900--Sobic001G018200 Sobic010G038700 Sobic010G038700 Sobic003G405900--Sobic010G038700 Sobic008G094600 Sobic008G094600 Sobic003G405900--Sobic008G094600 Sobic001G532100 Sobic001G532100 Sobic008G137600--Sobic001G532100 Sobic001G402300 Sobic001G402300 Sobic008G137600--Sobic001G402300 Sobic001G294900 Sobic001G294900 Sobic008G137600--Sobic001G294900 Sobic002G428200 Sobic002G428200 Sobic008G137600--Sobic002G428200 Sobic003G273400 Sobic003G273400 Sobic008G137600--Sobic003G273400 Sobic006G109700 Sobic006G109700 Sobic008G137600--Sobic006G109700 Sobic002G341800 Sobic002G341800 Sobic008G137600--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic008G137600--Sobic001G404100 Sobic001G502200 Sobic001G502200 Sobic008G137600--Sobic001G502200
Octagon: transcription factors


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