Gene annotation
Transcriptome id Sobic.002G298300.1
Synonym Sb02g032890
Functional annotation ubiquitin-related modifier 1, putative, expressed
UniProt C5X8F5
Pfam PF09138
Panther DB PTHR14986 PTHR14986:SF4
NCBI CDD KOG4146; Ubiquitin-like protein
KEGG Orthology K12161; ubiquitin related modifier 1
Gene Ontology GO:0005737; cytoplasm


Orthologs (automatic annotation)
TAIR AT3G61113 : Ubiquitin related modifier 1
RAP-DB (Rice) LOC_Os07g28280.1 : ubiquitin-related modifier 1, putative, expressed
MaizeGDB (Corn) Zm00025a047860
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199700 expressed protein -
2 Sobic.003G127300 expressed protein -
3 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
4 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
5 Sobic.004G352900 expressed protein -
6 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
7 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
8 Sobic.002G266800 expressed protein K18178: COA5, cytochrome c oxidase assembly factor 5
9 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
10 Sobic.009G168000 selT-like protein precursor, putative, expressed -
11 Sobic.001G069400 expressed protein -
12 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
13 Sobic.003G405900 mitochondrial import receptor subunit TOM20, putative, expressed -
14 Sobic.006G242300 - -
15 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
16 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
17 Sobic.007G079700 pentatricopeptide, putative, expressed -
18 Sobic.001G364600 transmembrane protein 85, putative, expressed -
19 Sobic.004G150200 expressed protein -
20 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1


Gene co-expression network
sample Sobic002G298300 Sobic002G298300 Sobic009G199700 Sobic009G199700 Sobic002G298300--Sobic009G199700 Sobic003G127300 Sobic003G127300 Sobic002G298300--Sobic003G127300 Sobic004G060600 Sobic004G060600 Sobic002G298300--Sobic004G060600 Sobic002G078400 Sobic002G078400 Sobic002G298300--Sobic002G078400 Sobic004G352900 Sobic004G352900 Sobic002G298300--Sobic004G352900 Sobic010G090900 Sobic010G090900 Sobic002G298300--Sobic010G090900 Sobic009G156300 Sobic009G156300 Sobic002G298300--Sobic009G156300 Sobic002G266800 Sobic002G266800 Sobic002G298300--Sobic002G266800 Sobic001G147100 Sobic001G147100 Sobic002G298300--Sobic001G147100 Sobic009G199700--Sobic003G127300 Sobic007G203700 Sobic007G203700 Sobic009G199700--Sobic007G203700 Sobic009G199700--Sobic002G298300 Sobic002G368400 Sobic002G368400 Sobic009G199700--Sobic002G368400 Sobic007G079700 Sobic007G079700 Sobic009G199700--Sobic007G079700 Sobic009G246950 Sobic009G246950 Sobic009G199700--Sobic009G246950 Sobic009G199700--Sobic004G060600 Sobic002G123200 Sobic002G123200 Sobic009G199700--Sobic002G123200 Sobic009G199700--Sobic002G078400 Sobic003G127300--Sobic009G199700 Sobic001G364600 Sobic001G364600 Sobic003G127300--Sobic001G364600 Sobic003G127300--Sobic002G298300 Sobic001G341500 Sobic001G341500 Sobic003G127300--Sobic001G341500 Sobic003G127300--Sobic004G060600 Sobic004G074300 Sobic004G074300 Sobic003G127300--Sobic004G074300 Sobic002G242200 Sobic002G242200 Sobic003G127300--Sobic002G242200 Sobic003G405900 Sobic003G405900 Sobic003G127300--Sobic003G405900 Sobic008G137600 Sobic008G137600 Sobic003G127300--Sobic008G137600 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic004G060600--Sobic001G364600 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic004G352900--Sobic010G029400 Sobic004G352900--Sobic009G131100 Sobic004G301900 Sobic004G301900 Sobic010G090900--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic010G090900--Sobic001G051200 Sobic001G098200 Sobic001G098200 Sobic010G090900--Sobic001G098200 Sobic001G123000 Sobic001G123000 Sobic010G090900--Sobic001G123000 Sobic006G119800 Sobic006G119800 Sobic010G090900--Sobic006G119800 Sobic004G119100 Sobic004G119100 Sobic010G090900--Sobic004G119100 Sobic003G250500 Sobic003G250500 Sobic010G090900--Sobic003G250500 Sobic001G263000 Sobic001G263000 Sobic010G090900--Sobic001G263000 Sobic002G092300 Sobic002G092300 Sobic010G090900--Sobic002G092300 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G156300--Sobic009G131100 Sobic009G156300--Sobic004G060600 Sobic009G156300--Sobic002G254650 Sobic009G156300--Sobic002G427900 Sobic009G156300--Sobic010G065400 Sobic002G266800--Sobic009G199700 Sobic006G266100 Sobic006G266100 Sobic002G266800--Sobic006G266100 Sobic002G378401 Sobic002G378401 Sobic002G266800--Sobic002G378401 Sobic002G266800--Sobic001G147100 Sobic002G266800--Sobic002G298300 Sobic001G148700 Sobic001G148700 Sobic002G266800--Sobic001G148700 Sobic002G266800--Sobic002G123200 Sobic006G099800 Sobic006G099800 Sobic002G266800--Sobic006G099800 Sobic003G434000 Sobic003G434000 Sobic002G266800--Sobic003G434000 Sobic003G424800 Sobic003G424800 Sobic001G147100--Sobic003G424800 Sobic001G404100 Sobic001G404100 Sobic001G147100--Sobic001G404100 Sobic006G011000 Sobic006G011000 Sobic001G147100--Sobic006G011000 Sobic009G187300 Sobic009G187300 Sobic001G147100--Sobic009G187300 Sobic002G406600 Sobic002G406600 Sobic001G147100--Sobic002G406600 Sobic001G147100--Sobic004G060600 Sobic001G408100 Sobic001G408100 Sobic001G147100--Sobic001G408100 Sobic009G104000 Sobic009G104000 Sobic001G147100--Sobic009G104000 Sobic001G147100--Sobic002G266800
Octagon: transcription factors


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