Gene annotation
Transcriptome id Sobic.002G266800.2,Sobic.002G266800.1
Synonym Sb02g030100
Functional annotation expressed protein
UniProt C5X5H4
Pfam PF10203
Panther DB PTHR28627
NCBI CDD KOG4114; Cytochrome c oxidase assembly protein PET191
KEGG Orthology K18178; COA5, cytochrome c oxidase assembly factor 5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10865 : -
RAP-DB (Rice) LOC_Os09g34310.2,LOC_Os09g34310.3 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G079830.10 , HORVU5Hr1G079830.12 , HORVU5Hr1G079830.13 , HORVU5Hr1G079830.14 , HORVU5Hr1G079830.8 , HORVU5Hr1G079830.9 , HORVU5Hr1G079830.6 , HORVU5Hr1G079830.7 , HORVU5Hr1G079830.4 , HORVU5Hr1G079830.5 , HORVU5Hr1G079830.2
Wheat TraesCS5A02G306000 , TraesCS5B02G306400 , TraesCS5D02G313000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199700 expressed protein -
2 Sobic.006G266100 expressed protein -
3 Sobic.002G378401 - -
4 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
5 Sobic.002G298300 ubiquitin-related modifier 1, putative, expressed K12161: ubiquitin related modifier 1
6 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
7 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
8 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
9 Sobic.003G434000 expressed protein K06170: PSENEN, presenilin enhancer 2
10 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
11 Sobic.002G254650 - -
12 Sobic.007G068000 postsynaptic protein CRIPT, putative, expressed -
13 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14
14 Sobic.009G187300 allyl alcohol dehydrogenase, putative, expressed -
15 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
16 Sobic.003G398300 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed K17805: PAM16, mitochondrial import inner membrane translocase subunit TIM16
17 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
18 Sobic.003G127700 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
19 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
20 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G266800 Sobic002G266800 Sobic009G199700 Sobic009G199700 Sobic002G266800--Sobic009G199700 Sobic006G266100 Sobic006G266100 Sobic002G266800--Sobic006G266100 Sobic002G378401 Sobic002G378401 Sobic002G266800--Sobic002G378401 Sobic001G147100 Sobic001G147100 Sobic002G266800--Sobic001G147100 Sobic002G298300 Sobic002G298300 Sobic002G266800--Sobic002G298300 Sobic001G148700 Sobic001G148700 Sobic002G266800--Sobic001G148700 Sobic002G123200 Sobic002G123200 Sobic002G266800--Sobic002G123200 Sobic006G099800 Sobic006G099800 Sobic002G266800--Sobic006G099800 Sobic003G434000 Sobic003G434000 Sobic002G266800--Sobic003G434000 Sobic003G127300 Sobic003G127300 Sobic009G199700--Sobic003G127300 Sobic007G203700 Sobic007G203700 Sobic009G199700--Sobic007G203700 Sobic009G199700--Sobic002G298300 Sobic002G368400 Sobic002G368400 Sobic009G199700--Sobic002G368400 Sobic007G079700 Sobic007G079700 Sobic009G199700--Sobic007G079700 Sobic009G246950 Sobic009G246950 Sobic009G199700--Sobic009G246950 Sobic004G060600 Sobic004G060600 Sobic009G199700--Sobic004G060600 Sobic009G199700--Sobic002G123200 Sobic002G078400 Sobic002G078400 Sobic009G199700--Sobic002G078400 Sobic006G266100--Sobic002G266800 Sobic006G266100--Sobic001G148700 Sobic002G279000 Sobic002G279000 Sobic006G266100--Sobic002G279000 Sobic002G116200 Sobic002G116200 Sobic006G266100--Sobic002G116200 Sobic006G266100--Sobic009G199700 Sobic006G266100--Sobic002G378401 Sobic002G090700 Sobic002G090700 Sobic006G266100--Sobic002G090700 Sobic001G216701 Sobic001G216701 Sobic006G266100--Sobic001G216701 Sobic001G392800 Sobic001G392800 Sobic006G266100--Sobic001G392800 Sobic003G127700 Sobic003G127700 Sobic002G378401--Sobic003G127700 Sobic003G024500 Sobic003G024500 Sobic002G378401--Sobic003G024500 Sobic009G149800 Sobic009G149800 Sobic002G378401--Sobic009G149800 Sobic007G068000 Sobic007G068000 Sobic002G378401--Sobic007G068000 Sobic002G378401--Sobic002G116200 Sobic001G233800 Sobic001G233800 Sobic002G378401--Sobic001G233800 Sobic003G150000 Sobic003G150000 Sobic002G378401--Sobic003G150000 Sobic006G231700 Sobic006G231700 Sobic002G378401--Sobic006G231700 Sobic001G225700 Sobic001G225700 Sobic002G378401--Sobic001G225700 Sobic003G424800 Sobic003G424800 Sobic001G147100--Sobic003G424800 Sobic001G404100 Sobic001G404100 Sobic001G147100--Sobic001G404100 Sobic006G011000 Sobic006G011000 Sobic001G147100--Sobic006G011000 Sobic009G187300 Sobic009G187300 Sobic001G147100--Sobic009G187300 Sobic002G406600 Sobic002G406600 Sobic001G147100--Sobic002G406600 Sobic001G147100--Sobic004G060600 Sobic001G408100 Sobic001G408100 Sobic001G147100--Sobic001G408100 Sobic009G104000 Sobic009G104000 Sobic001G147100--Sobic009G104000 Sobic001G147100--Sobic002G266800 Sobic002G298300--Sobic009G199700 Sobic002G298300--Sobic003G127300 Sobic002G298300--Sobic004G060600 Sobic002G298300--Sobic002G078400 Sobic004G352900 Sobic004G352900 Sobic002G298300--Sobic004G352900 Sobic010G090900 Sobic010G090900 Sobic002G298300--Sobic010G090900 Sobic009G156300 Sobic009G156300 Sobic002G298300--Sobic009G156300 Sobic002G298300--Sobic002G266800 Sobic002G298300--Sobic001G147100 Sobic004G063500 Sobic004G063500 Sobic001G148700--Sobic004G063500 Sobic001G441000 Sobic001G441000 Sobic001G148700--Sobic001G441000 Sobic010G262300 Sobic010G262300 Sobic001G148700--Sobic010G262300 Sobic001G134200 Sobic001G134200 Sobic001G148700--Sobic001G134200 Sobic001G148700--Sobic009G149800 Sobic001G067601 Sobic001G067601 Sobic001G148700--Sobic001G067601 Sobic004G259600 Sobic004G259600 Sobic001G148700--Sobic004G259600 Sobic007G161700 Sobic007G161700 Sobic001G148700--Sobic007G161700 Sobic001G031800 Sobic001G031800 Sobic001G148700--Sobic001G031800 Sobic002G123200--Sobic009G199700 Sobic002G123200--Sobic007G079700 Sobic001G136900 Sobic001G136900 Sobic002G123200--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic002G123200--Sobic002G204000 Sobic002G117200 Sobic002G117200 Sobic002G123200--Sobic002G117200 Sobic004G186000 Sobic004G186000 Sobic002G123200--Sobic004G186000 Sobic008G128600 Sobic008G128600 Sobic002G123200--Sobic008G128600 Sobic007G126200 Sobic007G126200 Sobic002G123200--Sobic007G126200 Sobic003G250500 Sobic003G250500 Sobic002G123200--Sobic003G250500 Sobic002G276900 Sobic002G276900 Sobic006G099800--Sobic002G276900 Sobic007G038800 Sobic007G038800 Sobic006G099800--Sobic007G038800 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic006G099800--Sobic003G434000 Sobic007G192100 Sobic007G192100 Sobic006G099800--Sobic007G192100 Sobic008G108500 Sobic008G108500 Sobic006G099800--Sobic008G108500 Sobic003G031200 Sobic003G031200 Sobic006G099800--Sobic003G031200 Sobic004G028800 Sobic004G028800 Sobic006G099800--Sobic004G028800 Sobic001G349400 Sobic001G349400 Sobic003G434000--Sobic001G349400 Sobic002G051200 Sobic002G051200 Sobic003G434000--Sobic002G051200 Sobic003G434000--Sobic006G099800 Sobic009G052500 Sobic009G052500 Sobic003G434000--Sobic009G052500 Sobic004G012800 Sobic004G012800 Sobic003G434000--Sobic004G012800 Sobic003G434000--Sobic007G038800 Sobic001G041100 Sobic001G041100 Sobic003G434000--Sobic001G041100 Sobic003G434000--Sobic002G204000 Sobic001G285300 Sobic001G285300 Sobic003G434000--Sobic001G285300
Octagon: transcription factors


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